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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170059737
CDZH01059261
172207
Bacteroidota
GGG
Pro
>WENV170058451
CDZH01009428
295385
Bacteroidota
CCA
Trp
>WENV170059014
CDZH01030731
117741
Bacteroidota
TAG
Leu
>WENV170059084
CDZH01033239
398829
Bacteroidota
CCT
Arg
>WENV170059186
CDZH01037447
398829
Bacteroidota
CCT
Arg
>WENV170060227
CDZH01079876
175838
Bacteroidota
GTT
Asn
>WENV170060228
CDZH01079876
175838
Bacteroidota
GTT
Asn
>WENV170060229
CDZH01079876
175838
Bacteroidota
GTT
Asn
>WENV170058973
CDZH01029376
175904
Bacteroidota
CGG
Pro
>WENV170060056
CDZH01072517
400161
Bacteroidota
GGT
Thr
>WENV170060324
CDZH01083165
289031
Bacteroidota
CAT
Met
>WENV170060249
CDZH01080528
289031
Bacteroidota
CAT
Met
>WENV170059685
CDZH01057343
289031
Bacteroidota
CAT
Met
>WENV170059492
CDZH01049605
289031
Bacteroidota
CAT
Met
>WENV170058452
CDZH01009432
156422
Bacteroidota
TAC
Val
>WENV170060052
CDZH01072434
280557
Bacteroidota
CAT
Met
>WENV170059352
CDZH01044321
20206
Bacteroidota
GGA
Ser
>WENV170058756
CDZH01022697
20206
Bacteroidota
GGA
Ser
>WENV170058209
CDZH01000650
483416
Bacteroidota
CTG
Gln
>WENV170059145
CDZH01036006
201819
Bacteroidota
CAT
Met
>WENV170059146
CDZH01036006
201819
Bacteroidota
CAT
Met
>WENV170059285
CDZH01041746
118221
Bacteroidota
CAA
Leu
>WENV170059935
CDZH01067217
56493
Bacteroidota
TGA
Ser
>WENV170058533
CDZH01013307
56493
Bacteroidota
TGA
Ser
>WENV170058472
CDZH01010084
175903
Bacteroidota
GTG
His
>WENV170058644
CDZH01018572
351598
Bacteroidota
CGG
Pro
>WENV170059013
CDZH01030730
351598
Bacteroidota
CGG
Pro
>WENV170060240
CDZH01079891
351598
Bacteroidota
CGG
Pro
>WENV170058695
CDZH01019940
118089
Bacteroidota
TAG
Leu
>WENV170060057
CDZH01072517
283316
Bacteroidota
CCA
Trp
>WENV170060138
CDZH01076035
178907
Bacteroidota
TCT
Arg
>WENV170059329
CDZH01043034
172085
Bacteroidota
TAC
Val
>WENV170058453
CDZH01009432
172085
Bacteroidota
TAC
Val
>WENV170059861
CDZH01064637
405877
Bacteroidota
GGT
Thr
>WENV170058904
CDZH01026824
405877
Bacteroidota
GGT
Thr
>WENV170058429
CDZH01008654
56385
Bacteroidota
TGA
Ser
>WENV170058599
CDZH01016572
178133
Bacteroidota
GAT
Ile
>WENV170059199
CDZH01037905
242241
Bacteroidota
GTC
Asp
>WENV170059198
CDZH01037905
242241
Bacteroidota
GTC
Asp
>WENV170058812
CDZH01024227
242241
Bacteroidota
GTC
Asp
>WENV170058613
CDZH01016701
21127
Bacteroidota
GGA
Ser
>WENV170060095
CDZH01073896
56072
Bacteroidota
TAA
Leu
>WENV170059290
CDZH01042073
57807
Bacteroidota
TGA
Ser
>WENV170060153
CDZH01077082
175902
Bacteroidota
GGC
Ala
>WENV170058405
CDZH01006714
398860
Bacteroidota
CTC
Glu
>WENV170059620
CDZH01055418
280451
Bacteroidota
CGT
Thr
>WENV170058802
CDZH01023993
418894
Bacteroidota
TTC
Glu
>WENV170058525
CDZH01012616
99847
Bacteroidota
GTA
Tyr
>WENV170060327
CDZH01083259
404109
Bacteroidota
CTC
Glu
>WENV170060326
CDZH01083259
404109
Bacteroidota
CTC
Glu
>WENV170058232
CDZH01000798
404109
Bacteroidota
CTC
Glu
>WENV170059730
CDZH01059250
186874
Bacteroidota
CAT
Met
>WENV170058515
CDZH01012007
186874
Bacteroidota
CAT
Met
>WENV170058821
CDZH01024676
46648
Bacteroidota
TAA
Leu
>WENV170058544
CDZH01013450
488746
Bacteroidota
CTG
Gln
>WENV170059668
CDZH01056091
488746
Bacteroidota
CTG
Gln
>WENV170060335
CDZH01083352
27524
Bacteroidota
GGA
Ser
>WENV170059596
CDZH01054650
175844
Bacteroidota
GGC
Ala
>WENV170060172
CDZH01077291
183889
Bacteroidota
GGC
Ala
>WENV170058583
CDZH01015723
183889
Bacteroidota
GGC
Ala
>WENV170058517
CDZH01012092
398828
Bacteroidota
CCG
Arg
>WENV170060143
CDZH01076452
398828
Bacteroidota
CCG
Arg
>WENV170058496
CDZH01011279
74084
Bacteroidota
CAG
Leu
>WENV170059798
CDZH01061919
140771
Bacteroidota
>WENV170058418
CDZH01007909
140771
Bacteroidota
>WENV170059792
CDZH01061919
140771
Bacteroidota
>WENV170059795
CDZH01061919
140771
Bacteroidota
>WENV170059256
CDZH01040544
176192
Bacteroidota
TCT
Arg
>WENV170058823
CDZH01024676
481328
Bacteroidota
TTG
Gln
>WENV170059277
CDZH01041192
280446
Bacteroidota
TTT
Lys
>WENV170059869
CDZH01064789
484496
Bacteroidota
TTG
Gln
>WENV170059530
CDZH01050831
484496
Bacteroidota
TTG
Gln
>WENV170059292
CDZH01042256
484496
Bacteroidota
TTG
Gln
>WENV170058466
CDZH01010060
484496
Bacteroidota
TTG
Gln
>WENV170058568
CDZH01015357
27502
Bacteroidota
GGA
Ser
>WENV170058987
CDZH01030045
365112
Bacteroidota
TTT
Lys
>WENV170059888
CDZH01065319
365112
Bacteroidota
TTT
Lys
>WENV170059483
CDZH01049438
398836
Bacteroidota
GCA
Cys
>WENV170059550
CDZH01051396
398836
Bacteroidota
GCA
Cys
>WENV170059545
CDZH01051327
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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