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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170062545
CDZJ01019099
285360
Bacteroidota
TTT
Lys
>WENV170062587
CDZJ01020625
117741
Bacteroidota
TAG
Leu
>WENV170062477
CDZJ01015978
398829
Bacteroidota
CCT
Arg
>WENV170062620
CDZJ01021886
398829
Bacteroidota
CCT
Arg
>WENV170062656
CDZJ01022815
398829
Bacteroidota
CCT
Arg
>WENV170062149
CDZJ01003922
175838
Bacteroidota
GTT
Asn
>WENV170062607
CDZJ01021559
175838
Bacteroidota
GTT
Asn
>WENV170062608
CDZJ01021559
175838
Bacteroidota
GTT
Asn
>WENV170062763
CDZJ01025912
175904
Bacteroidota
CGG
Pro
>WENV170062285
CDZJ01008101
280557
Bacteroidota
CAT
Met
>WENV170062280
CDZJ01008100
280557
Bacteroidota
CAT
Met
>WENV170062094
CDZJ01002061
280557
Bacteroidota
CAT
Met
>WENV170062815
CDZJ01027814
20206
Bacteroidota
GGA
Ser
>WENV170062212
CDZJ01005553
282712
Bacteroidota
TTT
Lys
>WENV170062667
CDZJ01023382
201819
Bacteroidota
CAT
Met
>WENV170062666
CDZJ01023382
201819
Bacteroidota
CAT
Met
>WENV170062510
CDZJ01017106
56493
Bacteroidota
TGA
Ser
>WENV170062480
CDZJ01016038
56493
Bacteroidota
TGA
Ser
>WENV170062208
CDZJ01005542
56493
Bacteroidota
TGA
Ser
>WENV170062615
CDZJ01021656
175903
Bacteroidota
GTG
His
>WENV170062689
CDZJ01023609
351598
Bacteroidota
CGG
Pro
>WENV170062662
CDZJ01022932
351598
Bacteroidota
CGG
Pro
>WENV170062492
CDZJ01016653
351598
Bacteroidota
CGG
Pro
>WENV170062443
CDZJ01014453
351598
Bacteroidota
CGG
Pro
>WENV170062241
CDZJ01006550
351598
Bacteroidota
CGG
Pro
>WENV170062159
CDZJ01004323
351598
Bacteroidota
CGG
Pro
>WENV170062333
CDZJ01009664
118089
Bacteroidota
TAG
Leu
>WENV170062141
CDZJ01003718
398872
Bacteroidota
GGT
Thr
>WENV170062405
CDZJ01012656
203954
Bacteroidota
GTC
Asp
>WENV170062275
CDZJ01007892
203954
Bacteroidota
GTC
Asp
>WENV170062072
CDZJ01001573
29791
Bacteroidota
GCT
Ser
>WENV170062549
CDZJ01019100
20449
Bacteroidota
GGA
Ser
>WENV170062579
CDZJ01020323
56072
Bacteroidota
TAA
Leu
>WENV170062110
CDZJ01002935
175902
Bacteroidota
GGC
Ala
>WENV170062073
CDZJ01001573
398860
Bacteroidota
CTC
Glu
>WENV170062312
CDZJ01008700
480404
Bacteroidota
TTG
Gln
>WENV170062126
CDZJ01003159
174201
Bacteroidota
GGG
Pro
>WENV170062223
CDZJ01005772
174201
Bacteroidota
GGG
Pro
>WENV170062581
CDZJ01020337
174201
Bacteroidota
GGG
Pro
>WENV170062523
CDZJ01017751
280451
Bacteroidota
CGT
Thr
>WENV170062774
CDZJ01026230
99847
Bacteroidota
GTA
Tyr
>WENV170062746
CDZJ01025048
99847
Bacteroidota
GTA
Tyr
>WENV170062481
CDZJ01016039
99847
Bacteroidota
GTA
Tyr
>WENV170062088
CDZJ01001941
399200
Bacteroidota
CAT
Met
>WENV170062438
CDZJ01014434
399200
Bacteroidota
CAT
Met
>WENV170062739
CDZJ01024823
488746
Bacteroidota
CTG
Gln
>WENV170062555
CDZJ01019100
280478
Bacteroidota
GCC
Gly
>WENV170062553
CDZJ01019100
280478
Bacteroidota
GCC
Gly
>WENV170062349
CDZJ01010462
280478
Bacteroidota
GCC
Gly
>WENV170062735
CDZJ01024755
27524
Bacteroidota
GGA
Ser
>WENV170062736
CDZJ01024759
175844
Bacteroidota
GGC
Ala
>WENV170062507
CDZJ01016929
480318
Bacteroidota
CTG
Gln
>WENV170062266
CDZJ01007650
398828
Bacteroidota
CCG
Arg
>WENV170062522
CDZJ01017596
159415
Bacteroidota
TAC
Val
>WENV170062521
CDZJ01017596
159415
Bacteroidota
TAC
Val
>WENV170062857
CDZJ01029645
140771
Bacteroidota
>WENV170062860
CDZJ01029645
140771
Bacteroidota
>WENV170062437
CDZJ01014434
176192
Bacteroidota
TCT
Arg
>WENV170062548
CDZJ01019100
400088
Bacteroidota
GGT
Thr
>WENV170062511
CDZJ01017106
69204
Bacteroidota
TGA
Ser
>WENV170062411
CDZJ01013060
69204
Bacteroidota
TGA
Ser
>WENV170062930
CDZJ01031604
280446
Bacteroidota
TTT
Lys
>WENV170062845
CDZJ01028966
280446
Bacteroidota
TTT
Lys
>WENV170062838
CDZJ01028765
280446
Bacteroidota
TTT
Lys
>WENV170062759
CDZJ01025749
280446
Bacteroidota
TTT
Lys
>WENV170062319
CDZJ01009313
280446
Bacteroidota
TTT
Lys
>WENV170062224
CDZJ01005772
280446
Bacteroidota
TTT
Lys
>WENV170062839
CDZJ01028766
484496
Bacteroidota
TTG
Gln
>WENV170062216
CDZJ01005731
484496
Bacteroidota
TTG
Gln
>WENV170062734
CDZJ01024752
484496
Bacteroidota
TTG
Gln
>WENV170062755
CDZJ01025749
27502
Bacteroidota
GGA
Ser
>WENV170062609
CDZJ01021566
27502
Bacteroidota
GGA
Ser
>WENV170062466
CDZJ01015420
27502
Bacteroidota
GGA
Ser
>WENV170062382
CDZJ01011456
27502
Bacteroidota
GGA
Ser
>WENV170062439
CDZJ01014434
285750
Bacteroidota
CCC
Gly
>WENV170062820
CDZJ01027922
365112
Bacteroidota
TTT
Lys
>WENV170062818
CDZJ01027920
365112
Bacteroidota
TTT
Lys
>WENV170062334
CDZJ01009665
365112
Bacteroidota
TTT
Lys
>WENV170062035
CDZJ01000236
398836
Bacteroidota
GCA
Cys
>WENV170062244
CDZJ01006553
398836
Bacteroidota
GCA
Cys
>WENV170062308
CDZJ01008651
398836
Bacteroidota
GCA
Cys
>WENV170062479
CDZJ01016015
398836
Bacteroidota
GCA
Cys
>WENV170062599
CDZJ01021318
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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