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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170063094
CDZK01004875
204388
Verrucomicrobiota
CAT
Met
>WENV170063586
CDZK01019082
406043
Verrucomicrobiota
GCA
Cys
>WENV170063100
CDZK01004965
293125
Verrucomicrobiota
GAA
Phe
>WENV170063588
CDZK01019082
406350
Verrucomicrobiota
TGT
Thr
>WENV170063858
CDZK01026810
148006
Verrucomicrobiota
CAA
Leu
>WENV170063585
CDZK01019082
101600
Verrucomicrobiota
AAG
Leu
>WENV170063610
CDZK01019414
293105
Verrucomicrobiota
CAT
Met
>WENV170063733
CDZK01023257
405901
Verrucomicrobiota
GCC
Gly
>WENV170063607
CDZK01019414
405901
Verrucomicrobiota
GCC
Gly
>WENV170063975
CDZK01030286
483642
Verrucomicrobiota
CCC
Gly
>WENV170064211
CDZK01037299
8960
Verrucomicrobiota
CGA
Ser
>WENV170063859
CDZK01026810
101463
Verrucomicrobiota
TAA
Leu
>WENV170063035
CDZK01002832
157427
Verrucomicrobiota
GTC
Asp
>WENV170063030
CDZK01002830
157427
Verrucomicrobiota
GTC
Asp
>WENV170063589
CDZK01019082
293079
Verrucomicrobiota
CGC
Ala
>WENV170064374
CDZK01043558
120352
Verrucomicrobiota
TAG
Leu
>WENV170063860
CDZK01026810
292636
Verrucomicrobiota
>WENV170063974
CDZK01030286
489412
Verrucomicrobiota
TCC
Gly
>WENV170063608
CDZK01019414
298263
Verrucomicrobiota
TTC
Glu
>WENV170063587
CDZK01019082
298263
Verrucomicrobiota
TTC
Glu
>WENV170063564
CDZK01018503
293069
Verrucomicrobiota
CTT
Lys
>WENV170063565
CDZK01018503
293069
Verrucomicrobiota
CTT
Lys
>WENV170063566
CDZK01018503
293069
Verrucomicrobiota
CTT
Lys
>WENV170064375
CDZK01043558
406336
Verrucomicrobiota
CCT
Arg
>WENV170064055
CDZK01032691
406369
Verrucomicrobiota
CCG
Arg
>WENV170063555
CDZK01018351
405940
Verrucomicrobiota
GGT
Thr
>WENV170063036
CDZK01002832
406044
Verrucomicrobiota
CTG
Gln
>WENV170063102
CDZK01004965
187556
Verrucomicrobiota
GGG
Pro
>WENV170063609
CDZK01019414
406037
Verrucomicrobiota
GTG
His
>WENV170063037
CDZK01002832
406360
Verrucomicrobiota
GAC
Val
>WENV170062998
CDZK01002005
406360
Verrucomicrobiota
GAC
Val
>WENV170063545
CDZK01017966
187548
Verrucomicrobiota
TCT
Arg
>WENV170063265
CDZK01009833
187548
Verrucomicrobiota
TCT
Arg
>WENV170063563
CDZK01018503
406040
Verrucomicrobiota
CGT
Thr
>WENV170064600
CDZK01049530
57652
Verrucomicrobiota
TGA
Ser
>WENV170064477
CDZK01046329
406039
Verrucomicrobiota
CAC
Val
>WENV170063557
CDZK01018351
75458
Verrucomicrobiota
CAG
Leu
>WENV170064478
CDZK01046329
406368
Verrucomicrobiota
TTG
Gln
>WENV170063031
CDZK01002830
21159
Verrucomicrobiota
GGA
Ser
>WENV170063870
CDZK01026979
101461
Verrucomicrobiota
GTA
Tyr
>WENV170063119
CDZK01005626
293095
Verrucomicrobiota
TTT
Lys
>WENV170063562
CDZK01018503
187561
Verrucomicrobiota
CGG
Pro
>WENV170063606
CDZK01019414
406342
Verrucomicrobiota
CAT
Met
>WENV170063869
CDZK01026979
406351
Verrucomicrobiota
GTT
Asn
>WENV170064476
CDZK01046329
303305
Verrucomicrobiota
GGC
Ala
>WENV170063854
CDZK01026602
406346
Verrucomicrobiota
TAC
Val
>WENV170063656
CDZK01021035
8938
Verrucomicrobiota
GCT
Ser
>WENV170063101
CDZK01004965
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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