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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170066392
CDZN01008155
99852
Bacillota
GTA
Tyr
>WENV170067022
CDZN01023748
405363
Bacillota
GCA
Cys
>WENV170066511
CDZN01011100
175842
Bacillota
CAC
Val
>WENV170067007
CDZN01023296
287289
Bacillota
GCC
Gly
>WENV170066219
CDZN01005102
215243
Bacillota
CAT
Met
>WENV170066148
CDZN01003497
190476
Bacillota
CAT
Met
>WENV170066875
CDZN01019835
73009
Bacillota
CAG
Leu
>WENV170066417
CDZN01008952
73009
Bacillota
CAG
Leu
>WENV170066498
CDZN01011064
291581
Bacillota
CGG
Pro
>WENV170066980
CDZN01022830
398835
Bacillota
GCC
Gly
>WENV170066381
CDZN01008012
398835
Bacillota
GCC
Gly
>WENV170066828
CDZN01018904
175831
Bacillota
ACG
Arg
>WENV170067047
CDZN01024364
480322
Bacillota
CTG
Gln
>WENV170066079
CDZN01002162
303718
Bacillota
TGT
Thr
>WENV170066189
CDZN01004653
73638
Bacillota
AAG
Leu
>WENV170066456
CDZN01010090
175911
Bacillota
GTC
Asp
>WENV170066293
CDZN01006668
175911
Bacillota
GTC
Asp
>WENV170066561
CDZN01011957
292374
Bacillota
TGC
Ala
>WENV170066982
CDZN01022864
179755
Bacillota
CCG
Arg
>WENV170066149
CDZN01003497
398832
Bacillota
TTC
Glu
>WENV170066859
CDZN01019726
201856
Bacillota
GAT
Ile
>WENV170066560
CDZN01011957
201856
Bacillota
GAT
Ile
>WENV170066255
CDZN01005727
321248
Bacillota
TAC
Val
>WENV170066979
CDZN01022830
280486
Bacillota
TGC
Ala
>WENV170066884
CDZN01020433
280486
Bacillota
TGC
Ala
>WENV170066233
CDZN01005523
56074
Bacillota
TGA
Ser
>WENV170066909
CDZN01020726
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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