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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
81 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170068264
CDZP01000333
117741
Bacteroidota
TAG
Leu
>WENV170068332
CDZP01003083
398829
Bacteroidota
CCT
Arg
>WENV170069405
CDZP01041242
398829
Bacteroidota
CCT
Arg
>WENV170068400
CDZP01004994
175838
Bacteroidota
GTT
Asn
>WENV170068401
CDZP01004994
175838
Bacteroidota
GTT
Asn
>WENV170068402
CDZP01004994
175838
Bacteroidota
GTT
Asn
>WENV170069623
CDZP01050300
175838
Bacteroidota
GTT
Asn
>WENV170069624
CDZP01050300
175838
Bacteroidota
GTT
Asn
>WENV170069625
CDZP01050300
175838
Bacteroidota
GTT
Asn
>WENV170068541
CDZP01010976
175904
Bacteroidota
CGG
Pro
>WENV170069495
CDZP01044664
175904
Bacteroidota
CGG
Pro
>WENV170068583
CDZP01012589
289031
Bacteroidota
CAT
Met
>WENV170068642
CDZP01013746
289031
Bacteroidota
CAT
Met
>WENV170068982
CDZP01027172
289031
Bacteroidota
CAT
Met
>WENV170068889
CDZP01023477
280557
Bacteroidota
CAT
Met
>WENV170069017
CDZP01027980
280557
Bacteroidota
CAT
Met
>WENV170068726
CDZP01017036
20206
Bacteroidota
GGA
Ser
>WENV170069535
CDZP01046943
483416
Bacteroidota
CTG
Gln
>WENV170069089
CDZP01031536
483416
Bacteroidota
CTG
Gln
>WENV170069290
CDZP01037644
201819
Bacteroidota
CAT
Met
>WENV170069289
CDZP01037644
201819
Bacteroidota
CAT
Met
>WENV170068371
CDZP01004256
56493
Bacteroidota
TGA
Ser
>WENV170068824
CDZP01020029
56493
Bacteroidota
TGA
Ser
>WENV170068511
CDZP01009358
175903
Bacteroidota
GTG
His
>WENV170069152
CDZP01033272
351598
Bacteroidota
CGG
Pro
>WENV170068990
CDZP01027246
351598
Bacteroidota
CGG
Pro
>WENV170068798
CDZP01019563
351598
Bacteroidota
CGG
Pro
>WENV170068624
CDZP01013063
351598
Bacteroidota
CGG
Pro
>WENV170069070
CDZP01030419
118089
Bacteroidota
TAG
Leu
>WENV170069241
CDZP01036303
203954
Bacteroidota
GTC
Asp
>WENV170069562
CDZP01048793
203954
Bacteroidota
GTC
Asp
>WENV170069652
CDZP01051154
405877
Bacteroidota
GGT
Thr
>WENV170068708
CDZP01015836
29791
Bacteroidota
GCT
Ser
>WENV170068980
CDZP01026869
20449
Bacteroidota
GGA
Ser
>WENV170069352
CDZP01039699
21127
Bacteroidota
GGA
Ser
>WENV170068296
CDZP01001585
56072
Bacteroidota
TAA
Leu
>WENV170069373
CDZP01040093
57807
Bacteroidota
TGA
Ser
>WENV170069272
CDZP01037603
57807
Bacteroidota
TGA
Ser
>WENV170069144
CDZP01033243
57807
Bacteroidota
TGA
Ser
>WENV170069046
CDZP01029558
57807
Bacteroidota
TGA
Ser
>WENV170068427
CDZP01006150
175902
Bacteroidota
GGC
Ala
>WENV170068281
CDZP01000802
280451
Bacteroidota
CGT
Thr
>WENV170068462
CDZP01007413
99847
Bacteroidota
GTA
Tyr
>WENV170069105
CDZP01031987
99847
Bacteroidota
GTA
Tyr
>WENV170069620
CDZP01050300
99847
Bacteroidota
GTA
Tyr
>WENV170068983
CDZP01027232
399200
Bacteroidota
CAT
Met
>WENV170068786
CDZP01019078
399200
Bacteroidota
CAT
Met
>WENV170069076
CDZP01030802
186874
Bacteroidota
CAT
Met
>WENV170068700
CDZP01015827
186874
Bacteroidota
CAT
Met
>WENV170069014
CDZP01027686
332896
Bacteroidota
TTT
Lys
>WENV170068975
CDZP01026831
332896
Bacteroidota
TTT
Lys
>WENV170068701
CDZP01015829
332896
Bacteroidota
TTT
Lys
>WENV170068725
CDZP01017036
488746
Bacteroidota
CTG
Gln
>WENV170068496
CDZP01008871
399026
Bacteroidota
CCT
Arg
>WENV170069594
CDZP01049572
280478
Bacteroidota
GCC
Gly
>WENV170068424
CDZP01005816
280478
Bacteroidota
GCC
Gly
>WENV170068390
CDZP01004674
280478
Bacteroidota
GCC
Gly
>WENV170068388
CDZP01004674
280478
Bacteroidota
GCC
Gly
>WENV170068788
CDZP01019544
175844
Bacteroidota
GGC
Ala
>WENV170069103
CDZP01031940
183889
Bacteroidota
GGC
Ala
>WENV170069630
CDZP01050539
158068
Bacteroidota
GGG
Pro
>WENV170069020
CDZP01028383
158068
Bacteroidota
GGG
Pro
>WENV170068878
CDZP01022693
158068
Bacteroidota
GGG
Pro
>WENV170068463
CDZP01007414
398828
Bacteroidota
CCG
Arg
>WENV170069121
CDZP01032418
140771
Bacteroidota
>WENV170068311
CDZP01001939
140771
Bacteroidota
>WENV170068308
CDZP01001939
140771
Bacteroidota
>WENV170068305
CDZP01001939
140771
Bacteroidota
>WENV170069654
CDZP01051156
176192
Bacteroidota
TCT
Arg
>WENV170068833
CDZP01020941
176192
Bacteroidota
TCT
Arg
>WENV170068478
CDZP01008160
400088
Bacteroidota
GGT
Thr
>WENV170068724
CDZP01017035
280446
Bacteroidota
TTT
Lys
>WENV170069524
CDZP01046234
280446
Bacteroidota
TTT
Lys
>WENV170068356
CDZP01003802
484496
Bacteroidota
TTG
Gln
>WENV170068652
CDZP01014150
484496
Bacteroidota
TTG
Gln
>WENV170069615
CDZP01050290
484496
Bacteroidota
TTG
Gln
>WENV170069406
CDZP01041245
285750
Bacteroidota
CCC
Gly
>WENV170069641
CDZP01050744
398836
Bacteroidota
GCA
Cys
>WENV170069480
CDZP01044538
398836
Bacteroidota
GCA
Cys
>WENV170069463
CDZP01043666
398836
Bacteroidota
GCA
Cys
>WENV170068494
CDZP01008622
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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