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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
90 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170070122
CDZQ01015041
117741
Bacteroidota
TAG
Leu
>WENV170070131
CDZQ01015121
398829
Bacteroidota
CCT
Arg
>WENV170070571
CDZQ01029446
398829
Bacteroidota
CCT
Arg
>WENV170070070
CDZQ01013222
175904
Bacteroidota
CGG
Pro
>WENV170070807
CDZQ01036393
175904
Bacteroidota
CGG
Pro
>WENV170071554
CDZQ01060712
289031
Bacteroidota
CAT
Met
>WENV170070413
CDZQ01025401
280553
Bacteroidota
TTT
Lys
>WENV170071508
CDZQ01058416
280553
Bacteroidota
TTT
Lys
>WENV170071390
CDZQ01055282
280557
Bacteroidota
CAT
Met
>WENV170071353
CDZQ01054277
280557
Bacteroidota
CAT
Met
>WENV170070744
CDZQ01035033
280557
Bacteroidota
CAT
Met
>WENV170071056
CDZQ01044729
20206
Bacteroidota
GGA
Ser
>WENV170069753
CDZQ01002335
398871
Bacteroidota
TTC
Glu
>WENV170069752
CDZQ01002335
398871
Bacteroidota
TTC
Glu
>WENV170070590
CDZQ01029871
175906
Bacteroidota
GTG
His
>WENV170070642
CDZQ01031743
175903
Bacteroidota
GTG
His
>WENV170071457
CDZQ01057379
118089
Bacteroidota
TAG
Leu
>WENV170070985
CDZQ01042814
118089
Bacteroidota
TAG
Leu
>WENV170070365
CDZQ01022824
118089
Bacteroidota
TAG
Leu
>WENV170070808
CDZQ01036393
280530
Bacteroidota
CCA
Trp
>WENV170071428
CDZQ01056359
175936
Bacteroidota
CAT
Met
>WENV170070799
CDZQ01036042
203954
Bacteroidota
GTC
Asp
>WENV170070798
CDZQ01036042
203954
Bacteroidota
GTC
Asp
>WENV170070797
CDZQ01036042
203954
Bacteroidota
GTC
Asp
>WENV170070487
CDZQ01027383
203954
Bacteroidota
GTC
Asp
>WENV170070128
CDZQ01015054
203954
Bacteroidota
GTC
Asp
>WENV170070118
CDZQ01014991
203954
Bacteroidota
GTC
Asp
>WENV170070127
CDZQ01015054
203954
Bacteroidota
GTC
Asp
>WENV170071427
CDZQ01056355
178907
Bacteroidota
TCT
Arg
>WENV170071249
CDZQ01050218
405877
Bacteroidota
GGT
Thr
>WENV170070044
CDZQ01012290
20449
Bacteroidota
GGA
Ser
>WENV170070513
CDZQ01027928
20449
Bacteroidota
GGA
Ser
>WENV170070911
CDZQ01040265
20449
Bacteroidota
GGA
Ser
>WENV170071334
CDZQ01053585
21127
Bacteroidota
GGA
Ser
>WENV170070729
CDZQ01034578
57807
Bacteroidota
TGA
Ser
>WENV170070866
CDZQ01038369
57807
Bacteroidota
TGA
Ser
>WENV170071406
CDZQ01055806
175902
Bacteroidota
GGC
Ala
>WENV170069792
CDZQ01003397
398860
Bacteroidota
CTC
Glu
>WENV170071429
CDZQ01056360
480404
Bacteroidota
TTG
Gln
>WENV170071422
CDZQ01056344
280451
Bacteroidota
CGT
Thr
>WENV170070021
CDZQ01011053
99847
Bacteroidota
GTA
Tyr
>WENV170069943
CDZQ01007539
399200
Bacteroidota
CAT
Met
>WENV170069971
CDZQ01008479
399200
Bacteroidota
CAT
Met
>WENV170071057
CDZQ01044739
399200
Bacteroidota
CAT
Met
>WENV170071176
CDZQ01048327
399200
Bacteroidota
CAT
Met
>WENV170070932
CDZQ01040755
186874
Bacteroidota
CAT
Met
>WENV170069730
CDZQ01001850
399026
Bacteroidota
CCT
Arg
>WENV170070067
CDZQ01013221
280478
Bacteroidota
GCC
Gly
>WENV170070601
CDZQ01030408
280478
Bacteroidota
GCC
Gly
>WENV170070603
CDZQ01030408
280478
Bacteroidota
GCC
Gly
>WENV170070654
CDZQ01031934
280478
Bacteroidota
GCC
Gly
>WENV170070815
CDZQ01036434
280478
Bacteroidota
GCC
Gly
>WENV170070817
CDZQ01036434
280478
Bacteroidota
GCC
Gly
>WENV170070916
CDZQ01040265
280478
Bacteroidota
GCC
Gly
>WENV170070918
CDZQ01040265
280478
Bacteroidota
GCC
Gly
>WENV170070920
CDZQ01040265
280478
Bacteroidota
GCC
Gly
>WENV170071509
CDZQ01058416
280478
Bacteroidota
GCC
Gly
>WENV170070459
CDZQ01026936
20766
Bacteroidota
GGA
Ser
>WENV170069750
CDZQ01002329
20766
Bacteroidota
GGA
Ser
>WENV170069780
CDZQ01002868
175844
Bacteroidota
GGC
Ala
>WENV170070575
CDZQ01029713
175844
Bacteroidota
GGC
Ala
>WENV170070981
CDZQ01042420
280532
Bacteroidota
>WENV170071456
CDZQ01057379
73011
Bacteroidota
CAA
Leu
>WENV170070366
CDZQ01022824
73011
Bacteroidota
CAA
Leu
>WENV170069990
CDZQ01009075
183889
Bacteroidota
GGC
Ala
>WENV170070898
CDZQ01039378
480318
Bacteroidota
CTG
Gln
>WENV170070481
CDZQ01027374
158068
Bacteroidota
GGG
Pro
>WENV170070810
CDZQ01036393
74084
Bacteroidota
CAG
Leu
>WENV170071510
CDZQ01058416
74084
Bacteroidota
CAG
Leu
>WENV170070760
CDZQ01035502
480325
Bacteroidota
CTG
Gln
>WENV170070759
CDZQ01035502
480325
Bacteroidota
CTG
Gln
>WENV170070026
CDZQ01011490
480325
Bacteroidota
CTG
Gln
>WENV170070025
CDZQ01011490
480325
Bacteroidota
CTG
Gln
>WENV170070024
CDZQ01011490
480325
Bacteroidota
CTG
Gln
>WENV170071358
CDZQ01054321
176192
Bacteroidota
TCT
Arg
>WENV170071561
CDZQ01060724
176192
Bacteroidota
TCT
Arg
>WENV170070522
CDZQ01028454
400088
Bacteroidota
GGT
Thr
>WENV170071034
CDZQ01044161
280446
Bacteroidota
TTT
Lys
>WENV170071352
CDZQ01054273
280446
Bacteroidota
TTT
Lys
>WENV170069977
CDZQ01008666
484496
Bacteroidota
TTG
Gln
>WENV170071102
CDZQ01045724
484496
Bacteroidota
TTG
Gln
>WENV170071426
CDZQ01056355
285750
Bacteroidota
CCC
Gly
>WENV170069803
CDZQ01003766
285750
Bacteroidota
CCC
Gly
>WENV170069859
CDZQ01005173
117804
Bacteroidota
TAG
Leu
>WENV170071531
CDZQ01059767
398836
Bacteroidota
GCA
Cys
>WENV170071421
CDZQ01056342
398836
Bacteroidota
GCA
Cys
>WENV170071161
CDZQ01048029
398836
Bacteroidota
GCA
Cys
>WENV170070633
CDZQ01031467
398836
Bacteroidota
GCA
Cys
>WENV170070273
CDZQ01019502
398836
Bacteroidota
GCA
Cys
>WENV170069659
CDZQ01000001
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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