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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
90 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170072966
CDZR01057249
99852
Bacillota
GTA
Tyr
>WENV170072916
CDZR01055042
343590
Bacillota
GCC
Gly
>WENV170071978
CDZR01014723
280500
Bacillota
TGC
Ala
>WENV170072113
CDZR01020836
280500
Bacillota
TGC
Ala
>WENV170072901
CDZR01054227
405363
Bacillota
GCA
Cys
>WENV170072164
CDZR01023883
290391
Bacillota
TAC
Val
>WENV170072168
CDZR01023883
290391
Bacillota
TAC
Val
>WENV170072186
CDZR01024739
290391
Bacillota
TAC
Val
>WENV170072190
CDZR01024739
290391
Bacillota
TAC
Val
>WENV170072194
CDZR01024739
290391
Bacillota
TAC
Val
>WENV170072280
CDZR01028163
290391
Bacillota
TAC
Val
>WENV170072183
CDZR01024677
280428
Bacillota
GAA
Phe
>WENV170072931
CDZR01055635
229015
Bacillota
GTG
His
>WENV170071581
CDZR01000001
179917
Bacillota
CAT
Met
>WENV170071798
CDZR01006794
179917
Bacillota
CAT
Met
>WENV170072021
CDZR01017073
175842
Bacillota
CAC
Val
>WENV170071938
CDZR01013104
175842
Bacillota
CAC
Val
>WENV170072981
CDZR01058348
236579
Bacillota
GAT
Ile
>WENV170072980
CDZR01058348
295166
Bacillota
TGC
Ala
>WENV170073021
CDZR01060240
215243
Bacillota
CAT
Met
>WENV170072383
CDZR01032405
73664
Bacillota
CAG
Leu
>WENV170073020
CDZR01060177
280447
Bacillota
GAC
Val
>WENV170072954
CDZR01056857
280447
Bacillota
GAC
Val
>WENV170072652
CDZR01046063
280447
Bacillota
GAC
Val
>WENV170072828
CDZR01051386
5692
Bacillota
GCT
Ser
>WENV170072555
CDZR01040779
284723
Bacillota
TAC
Val
>WENV170071795
CDZR01006794
284723
Bacillota
TAC
Val
>WENV170072496
CDZR01038444
73009
Bacillota
CAG
Leu
>WENV170071912
CDZR01011963
189473
Bacillota
GAT
Ile
>WENV170071668
CDZR01002828
291581
Bacillota
CGG
Pro
>WENV170072577
CDZR01041735
175859
Bacillota
TCT
Arg
>WENV170072534
CDZR01040061
175859
Bacillota
TCT
Arg
>WENV170071744
CDZR01005160
175859
Bacillota
TCT
Arg
>WENV170071610
CDZR01000941
290325
Bacillota
GCC
Gly
>WENV170072292
CDZR01029382
175831
Bacillota
ACG
Arg
>WENV170072244
CDZR01027167
175831
Bacillota
ACG
Arg
>WENV170071683
CDZR01003380
175831
Bacillota
ACG
Arg
>WENV170072072
CDZR01018421
179810
Bacillota
TCT
Arg
>WENV170072930
CDZR01055635
179810
Bacillota
TCT
Arg
>WENV170072059
CDZR01018404
284627
Bacillota
GAA
Phe
>WENV170071778
CDZR01005773
284627
Bacillota
GAA
Phe
>WENV170071859
CDZR01009256
295350
Bacillota
TGC
Ala
>WENV170072073
CDZR01018543
27216
Bacillota
GCT
Ser
>WENV170072983
CDZR01058711
480322
Bacillota
CTG
Gln
>WENV170072801
CDZR01050941
480322
Bacillota
CTG
Gln
>WENV170072704
CDZR01047366
480322
Bacillota
CTG
Gln
>WENV170072182
CDZR01024623
480322
Bacillota
CTG
Gln
>WENV170071911
CDZR01011870
480322
Bacillota
CTG
Gln
>WENV170071667
CDZR01002828
480322
Bacillota
CTG
Gln
>WENV170072796
CDZR01050424
175868
Bacillota
GTT
Asn
>WENV170072716
CDZR01047893
175868
Bacillota
GTT
Asn
>WENV170072795
CDZR01050424
398854
Bacillota
CTC
Glu
>WENV170072715
CDZR01047893
398854
Bacillota
CTC
Glu
>WENV170071909
CDZR01011695
398854
Bacillota
CTC
Glu
>WENV170071881
CDZR01010560
398854
Bacillota
CTC
Glu
>WENV170072151
CDZR01022756
480324
Bacillota
TTG
Gln
>WENV170072137
CDZR01021964
480324
Bacillota
TTG
Gln
>WENV170072099
CDZR01020000
480324
Bacillota
TTG
Gln
>WENV170071861
CDZR01009264
303718
Bacillota
TGT
Thr
>WENV170072103
CDZR01020366
303718
Bacillota
TGT
Thr
>WENV170072660
CDZR01046124
323864
Bacillota
TGC
Ala
>WENV170072524
CDZR01039886
323864
Bacillota
TGC
Ala
>WENV170071653
CDZR01002354
323864
Bacillota
TGC
Ala
>WENV170072991
CDZR01059260
280444
Bacillota
GGT
Thr
>WENV170072217
CDZR01026127
280444
Bacillota
GGT
Thr
>WENV170072087
CDZR01019743
280444
Bacillota
GGT
Thr
>WENV170071896
CDZR01011203
317482
Bacillota
TAC
Val
>WENV170071614
CDZR01001422
483485
Bacillota
CCC
Gly
>WENV170072174
CDZR01023944
321753
Bacillota
GCC
Gly
>WENV170072418
CDZR01035052
179755
Bacillota
CCG
Arg
>WENV170072854
CDZR01052835
179755
Bacillota
CCG
Arg
>WENV170072035
CDZR01017320
118669
Bacillota
GTA
Tyr
>WENV170071691
CDZR01003750
398852
Bacillota
CTC
Glu
>WENV170072621
CDZR01043880
398852
Bacillota
CTC
Glu
>WENV170072710
CDZR01047721
398852
Bacillota
CTC
Glu
>WENV170072762
CDZR01049475
175857
Bacillota
GTG
His
>WENV170072281
CDZR01028163
285756
Bacillota
GCC
Gly
>WENV170072193
CDZR01024739
285756
Bacillota
GCC
Gly
>WENV170072189
CDZR01024739
285756
Bacillota
GCC
Gly
>WENV170072171
CDZR01023883
285756
Bacillota
GCC
Gly
>WENV170072167
CDZR01023883
285756
Bacillota
GCC
Gly
>WENV170072163
CDZR01023883
285756
Bacillota
GCC
Gly
>WENV170072307
CDZR01029637
398833
Bacillota
TGT
Thr
>WENV170071686
CDZR01003442
398833
Bacillota
TGT
Thr
>WENV170072775
CDZR01049750
175849
Bacillota
GTC
Asp
>WENV170072086
CDZR01019743
175849
Bacillota
GTC
Asp
>WENV170072251
CDZR01027369
280463
Bacillota
TTT
Lys
>WENV170071921
CDZR01012434
280486
Bacillota
TGC
Ala
>WENV170072911
CDZR01054430
56074
Bacillota
TGA
Ser
>WENV170071871
CDZR01009916
56074
Bacillota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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