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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170073376
CDZS01013891
280500
Bacillota
TGC
Ala
>WENV170074282
CDZS01047082
280500
Bacillota
TGC
Ala
>WENV170073160
CDZS01004549
179917
Bacillota
CAT
Met
>WENV170073451
CDZS01016366
179917
Bacillota
CAT
Met
>WENV170073223
CDZS01006780
280492
Bacillota
CTT
Lys
>WENV170074486
CDZS01054762
280492
Bacillota
CTT
Lys
>WENV170073722
CDZS01027132
175842
Bacillota
CAC
Val
>WENV170074156
CDZS01042424
175842
Bacillota
CAC
Val
>WENV170073099
CDZS01002709
179563
Bacillota
GAT
Ile
>WENV170073098
CDZS01002709
295166
Bacillota
TGC
Ala
>WENV170073801
CDZS01031150
215243
Bacillota
CAT
Met
>WENV170073643
CDZS01023562
215243
Bacillota
CAT
Met
>WENV170074512
CDZS01055662
190476
Bacillota
CAT
Met
>WENV170073787
CDZS01030268
82124
Bacillota
TAA
Leu
>WENV170073127
CDZS01003209
82124
Bacillota
TAA
Leu
>WENV170074153
CDZS01042209
73664
Bacillota
CAG
Leu
>WENV170073637
CDZS01023111
73664
Bacillota
CAG
Leu
>WENV170074234
CDZS01045266
280447
Bacillota
GAC
Val
>WENV170074155
CDZS01042262
5692
Bacillota
GCT
Ser
>WENV170073782
CDZS01029892
284723
Bacillota
TAC
Val
>WENV170073780
CDZS01029892
284723
Bacillota
TAC
Val
>WENV170073778
CDZS01029892
284723
Bacillota
TAC
Val
>WENV170073733
CDZS01027776
284723
Bacillota
TAC
Val
>WENV170073448
CDZS01016366
284723
Bacillota
TAC
Val
>WENV170073320
CDZS01011018
284723
Bacillota
TAC
Val
>WENV170073318
CDZS01011018
284723
Bacillota
TAC
Val
>WENV170073157
CDZS01004549
284723
Bacillota
TAC
Val
>WENV170073867
CDZS01032649
73009
Bacillota
CAG
Leu
>WENV170074216
CDZS01044666
291581
Bacillota
CGG
Pro
>WENV170073755
CDZS01028866
291581
Bacillota
CGG
Pro
>WENV170074304
CDZS01047656
175859
Bacillota
TCT
Arg
>WENV170073982
CDZS01036022
175859
Bacillota
TCT
Arg
>WENV170073559
CDZS01020110
175859
Bacillota
TCT
Arg
>WENV170074479
CDZS01054247
290325
Bacillota
GCC
Gly
>WENV170073981
CDZS01036001
175831
Bacillota
ACG
Arg
>WENV170073274
CDZS01009564
175831
Bacillota
ACG
Arg
>WENV170073217
CDZS01006771
179810
Bacillota
TCT
Arg
>WENV170073476
CDZS01017208
284627
Bacillota
GAA
Phe
>WENV170073628
CDZS01022727
294020
Bacillota
TAC
Val
>WENV170073740
CDZS01028082
295350
Bacillota
TGC
Ala
>WENV170074325
CDZS01048133
480322
Bacillota
CTG
Gln
>WENV170074158
CDZS01042509
480322
Bacillota
CTG
Gln
>WENV170074032
CDZS01038921
187364
Bacillota
CAT
Met
>WENV170074109
CDZS01041145
175868
Bacillota
GTT
Asn
>WENV170073582
CDZS01020880
175868
Bacillota
GTT
Asn
>WENV170073133
CDZS01003849
175868
Bacillota
GTT
Asn
>WENV170073355
CDZS01012383
119278
Bacillota
TAG
Leu
>WENV170073489
CDZS01017505
398854
Bacillota
CTC
Glu
>WENV170073988
CDZS01036104
291576
Bacillota
CCC
Gly
>WENV170073746
CDZS01028339
480324
Bacillota
TTG
Gln
>WENV170073073
CDZS01002184
480324
Bacillota
TTG
Gln
>WENV170073447
CDZS01016366
175899
Bacillota
GTC
Asp
>WENV170074323
CDZS01048036
175899
Bacillota
GTC
Asp
>WENV170073724
CDZS01027301
303718
Bacillota
TGT
Thr
>WENV170074151
CDZS01042209
56079
Bacillota
AAG
Leu
>WENV170074152
CDZS01042209
56079
Bacillota
AAG
Leu
>WENV170074445
CDZS01052638
323864
Bacillota
TGC
Ala
>WENV170073267
CDZS01009008
323864
Bacillota
TGC
Ala
>WENV170073598
CDZS01021374
117745
Bacillota
GTA
Tyr
>WENV170073475
CDZS01017181
280444
Bacillota
GGT
Thr
>WENV170073328
CDZS01011142
280444
Bacillota
GGT
Thr
>WENV170073857
CDZS01032265
483485
Bacillota
CCC
Gly
>WENV170073136
CDZS01004106
321753
Bacillota
GCC
Gly
>WENV170073463
CDZS01016497
321753
Bacillota
GCC
Gly
>WENV170073474
CDZS01017135
321753
Bacillota
GCC
Gly
>WENV170074508
CDZS01055569
321753
Bacillota
GCC
Gly
>WENV170073886
CDZS01033550
179755
Bacillota
CCG
Arg
>WENV170073848
CDZS01032118
398832
Bacillota
TTC
Glu
>WENV170073126
CDZS01003209
118669
Bacillota
GTA
Tyr
>WENV170074428
CDZS01052088
294275
Bacillota
TGC
Ala
>WENV170074317
CDZS01048005
280462
Bacillota
GAA
Phe
>WENV170074149
CDZS01042161
398852
Bacillota
CTC
Glu
>WENV170073652
CDZS01024023
398852
Bacillota
CTC
Glu
>WENV170073604
CDZS01021859
398852
Bacillota
CTC
Glu
>WENV170073278
CDZS01009575
321248
Bacillota
TAC
Val
>WENV170073662
CDZS01024952
406186
Bacillota
CTC
Glu
>WENV170073661
CDZS01024952
406186
Bacillota
CTC
Glu
>WENV170073657
CDZS01024617
406186
Bacillota
CTC
Glu
>WENV170073656
CDZS01024617
406186
Bacillota
CTC
Glu
>WENV170074172
CDZS01042566
175857
Bacillota
GTG
His
>WENV170074127
CDZS01041222
175857
Bacillota
GTG
His
>WENV170073322
CDZS01011019
175857
Bacillota
GTG
His
>WENV170073324
CDZS01011019
280463
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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