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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
104 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170075840
CDZT01047810
117741
Bacteroidota
TAG
Leu
>WENV170075398
CDZT01032852
175838
Bacteroidota
GTT
Asn
>WENV170075399
CDZT01032852
175838
Bacteroidota
GTT
Asn
>WENV170075513
CDZT01037469
175838
Bacteroidota
GTT
Asn
>WENV170075514
CDZT01037469
175838
Bacteroidota
GTT
Asn
>WENV170075515
CDZT01037469
175838
Bacteroidota
GTT
Asn
>WENV170075516
CDZT01037469
175838
Bacteroidota
GTT
Asn
>WENV170075258
CDZT01027564
404226
Bacteroidota
CCT
Arg
>WENV170075967
CDZT01051252
175904
Bacteroidota
CGG
Pro
>WENV170074713
CDZT01005384
289031
Bacteroidota
CAT
Met
>WENV170074991
CDZT01017997
289031
Bacteroidota
CAT
Met
>WENV170076123
CDZT01057467
289031
Bacteroidota
CAT
Met
>WENV170076126
CDZT01057468
289031
Bacteroidota
CAT
Met
>WENV170074570
CDZT01000545
280557
Bacteroidota
CAT
Met
>WENV170074999
CDZT01018114
280557
Bacteroidota
CAT
Met
>WENV170075015
CDZT01019115
280557
Bacteroidota
CAT
Met
>WENV170076289
CDZT01063379
280557
Bacteroidota
CAT
Met
>WENV170075267
CDZT01028068
20206
Bacteroidota
GGA
Ser
>WENV170075502
CDZT01036896
483416
Bacteroidota
CTG
Gln
>WENV170074596
CDZT01001058
483416
Bacteroidota
CTG
Gln
>WENV170076281
CDZT01063219
282712
Bacteroidota
TTT
Lys
>WENV170075511
CDZT01037003
398871
Bacteroidota
TTC
Glu
>WENV170074816
CDZT01009881
201819
Bacteroidota
CAT
Met
>WENV170074815
CDZT01009881
201819
Bacteroidota
CAT
Met
>WENV170074758
CDZT01006852
56493
Bacteroidota
TGA
Ser
>WENV170074914
CDZT01014528
175906
Bacteroidota
GTG
His
>WENV170075824
CDZT01047241
175903
Bacteroidota
GTG
His
>WENV170075144
CDZT01023214
118089
Bacteroidota
TAG
Leu
>WENV170076214
CDZT01060308
203954
Bacteroidota
GTC
Asp
>WENV170075636
CDZT01040997
203954
Bacteroidota
GTC
Asp
>WENV170075362
CDZT01031695
203954
Bacteroidota
GTC
Asp
>WENV170075739
CDZT01044306
178907
Bacteroidota
TCT
Arg
>WENV170075867
CDZT01049070
405877
Bacteroidota
GGT
Thr
>WENV170075947
CDZT01051247
29791
Bacteroidota
GCT
Ser
>WENV170074753
CDZT01006360
182267
Bacteroidota
GTT
Asn
>WENV170074752
CDZT01006360
182267
Bacteroidota
GTT
Asn
>WENV170074751
CDZT01006360
182267
Bacteroidota
GTT
Asn
>WENV170076153
CDZT01058027
20449
Bacteroidota
GGA
Ser
>WENV170075912
CDZT01050223
21127
Bacteroidota
GGA
Ser
>WENV170074796
CDZT01008799
21127
Bacteroidota
GGA
Ser
>WENV170076205
CDZT01059584
56072
Bacteroidota
TAA
Leu
>WENV170074742
CDZT01006247
57807
Bacteroidota
TGA
Ser
>WENV170075418
CDZT01033339
57807
Bacteroidota
TGA
Ser
>WENV170075452
CDZT01035008
57807
Bacteroidota
TGA
Ser
>WENV170075417
CDZT01033337
175886
Bacteroidota
GGC
Ala
>WENV170076267
CDZT01062548
175902
Bacteroidota
GGC
Ala
>WENV170075214
CDZT01026141
175902
Bacteroidota
GGC
Ala
>WENV170075011
CDZT01018618
175902
Bacteroidota
GGC
Ala
>WENV170074962
CDZT01017464
179697
Bacteroidota
TGT
Thr
>WENV170075948
CDZT01051247
398860
Bacteroidota
CTC
Glu
>WENV170075936
CDZT01051131
280451
Bacteroidota
CGT
Thr
>WENV170076225
CDZT01060452
418894
Bacteroidota
TTC
Glu
>WENV170076224
CDZT01060452
418894
Bacteroidota
TTC
Glu
>WENV170075391
CDZT01032753
99847
Bacteroidota
GTA
Tyr
>WENV170075160
CDZT01023675
99847
Bacteroidota
GTA
Tyr
>WENV170074814
CDZT01009879
99847
Bacteroidota
GTA
Tyr
>WENV170074600
CDZT01001148
399200
Bacteroidota
CAT
Met
>WENV170074875
CDZT01012479
399200
Bacteroidota
CAT
Met
>WENV170075178
CDZT01024149
399200
Bacteroidota
CAT
Met
>WENV170075338
CDZT01030581
399200
Bacteroidota
CAT
Met
>WENV170075375
CDZT01032217
399200
Bacteroidota
CAT
Met
>WENV170076277
CDZT01063218
186874
Bacteroidota
CAT
Met
>WENV170076196
CDZT01058690
186874
Bacteroidota
CAT
Met
>WENV170075765
CDZT01044812
186874
Bacteroidota
CAT
Met
>WENV170074994
CDZT01017997
186874
Bacteroidota
CAT
Met
>WENV170074708
CDZT01005384
186874
Bacteroidota
CAT
Met
>WENV170075080
CDZT01021147
332896
Bacteroidota
TTT
Lys
>WENV170075215
CDZT01026146
332896
Bacteroidota
TTT
Lys
>WENV170075469
CDZT01035575
332896
Bacteroidota
TTT
Lys
>WENV170075943
CDZT01051241
332896
Bacteroidota
TTT
Lys
>WENV170075266
CDZT01028068
488746
Bacteroidota
CTG
Gln
>WENV170076164
CDZT01058027
280478
Bacteroidota
GCC
Gly
>WENV170076163
CDZT01058027
280478
Bacteroidota
GCC
Gly
>WENV170076161
CDZT01058027
280478
Bacteroidota
GCC
Gly
>WENV170076159
CDZT01058027
280478
Bacteroidota
GCC
Gly
>WENV170075525
CDZT01038023
280478
Bacteroidota
GCC
Gly
>WENV170075271
CDZT01028126
280478
Bacteroidota
GCC
Gly
>WENV170074770
CDZT01007344
186108
Bacteroidota
GTT
Asn
>WENV170075154
CDZT01023302
280515
Bacteroidota
CCA
Trp
>WENV170075978
CDZT01051816
183889
Bacteroidota
GGC
Ala
>WENV170074985
CDZT01017995
183889
Bacteroidota
GGC
Ala
>WENV170074864
CDZT01011910
183889
Bacteroidota
GGC
Ala
>WENV170075462
CDZT01035017
158068
Bacteroidota
GGG
Pro
>WENV170075265
CDZT01028068
158068
Bacteroidota
GGG
Pro
>WENV170076219
CDZT01060326
398828
Bacteroidota
CCG
Arg
>WENV170074664
CDZT01003961
74084
Bacteroidota
CAG
Leu
>WENV170075833
CDZT01047743
480325
Bacteroidota
CTG
Gln
>WENV170075020
CDZT01019559
140771
Bacteroidota
>WENV170075325
CDZT01030101
140771
Bacteroidota
>WENV170075928
CDZT01051131
140771
Bacteroidota
>WENV170075931
CDZT01051131
140771
Bacteroidota
>WENV170075934
CDZT01051131
140771
Bacteroidota
>WENV170075921
CDZT01050707
176192
Bacteroidota
TCT
Arg
>WENV170075093
CDZT01021690
176192
Bacteroidota
TCT
Arg
>WENV170076151
CDZT01058027
400088
Bacteroidota
GGT
Thr
>WENV170075255
CDZT01027554
280446
Bacteroidota
TTT
Lys
>WENV170075897
CDZT01050218
484496
Bacteroidota
TTG
Gln
>WENV170075888
CDZT01049669
484496
Bacteroidota
TTG
Gln
>WENV170075445
CDZT01034497
484496
Bacteroidota
TTG
Gln
>WENV170075339
CDZT01030581
285750
Bacteroidota
CCC
Gly
>WENV170075437
CDZT01034041
398836
Bacteroidota
GCA
Cys
>WENV170075821
CDZT01047238
398836
Bacteroidota
GCA
Cys
>WENV170075914
CDZT01050241
398836
Bacteroidota
GCA
Cys
>WENV170075925
CDZT01050749
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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