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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170075600
CDZT01040979
204388
Verrucomicrobiota
CAT
Met
>WENV170074545
CDZT01000002
406043
Verrucomicrobiota
GCA
Cys
>WENV170074776
CDZT01007766
293125
Verrucomicrobiota
GAA
Phe
>WENV170076199
CDZT01059004
406350
Verrucomicrobiota
TGT
Thr
>WENV170075642
CDZT01041535
148006
Verrucomicrobiota
CAA
Leu
>WENV170076003
CDZT01052402
293105
Verrucomicrobiota
CAT
Met
>WENV170076241
CDZT01060848
405901
Verrucomicrobiota
GCC
Gly
>WENV170075878
CDZT01049600
405901
Verrucomicrobiota
GCC
Gly
>WENV170074877
CDZT01012484
405901
Verrucomicrobiota
GCC
Gly
>WENV170074779
CDZT01007766
483642
Verrucomicrobiota
CCC
Gly
>WENV170075179
CDZT01024207
157427
Verrucomicrobiota
GTC
Asp
>WENV170075043
CDZT01019703
157427
Verrucomicrobiota
GTC
Asp
>WENV170075690
CDZT01043147
293079
Verrucomicrobiota
CGC
Ala
>WENV170076212
CDZT01060299
120352
Verrucomicrobiota
TAG
Leu
>WENV170074775
CDZT01007766
489412
Verrucomicrobiota
TCC
Gly
>WENV170076034
CDZT01053474
293069
Verrucomicrobiota
CTT
Lys
>WENV170076035
CDZT01053474
293069
Verrucomicrobiota
CTT
Lys
>WENV170075711
CDZT01043349
406336
Verrucomicrobiota
CCT
Arg
>WENV170075662
CDZT01042016
406369
Verrucomicrobiota
CCG
Arg
>WENV170076259
CDZT01061443
405940
Verrucomicrobiota
GGT
Thr
>WENV170075659
CDZT01042003
406044
Verrucomicrobiota
CTG
Gln
>WENV170074778
CDZT01007766
187556
Verrucomicrobiota
GGG
Pro
>WENV170076002
CDZT01052402
406037
Verrucomicrobiota
GTG
His
>WENV170076183
CDZT01058534
406360
Verrucomicrobiota
GAC
Val
>WENV170075316
CDZT01029571
187548
Verrucomicrobiota
TCT
Arg
>WENV170076033
CDZT01053474
406040
Verrucomicrobiota
CGT
Thr
>WENV170076184
CDZT01058534
57652
Verrucomicrobiota
TGA
Ser
>WENV170075886
CDZT01049661
406039
Verrucomicrobiota
CAC
Val
>WENV170076099
CDZT01056093
406368
Verrucomicrobiota
TTG
Gln
>WENV170076235
CDZT01060835
101461
Verrucomicrobiota
GTA
Tyr
>WENV170076076
CDZT01054993
293095
Verrucomicrobiota
TTT
Lys
>WENV170076036
CDZT01053474
187561
Verrucomicrobiota
CGG
Pro
>WENV170074876
CDZT01012484
406342
Verrucomicrobiota
CAT
Met
>WENV170076234
CDZT01060835
406351
Verrucomicrobiota
GTT
Asn
>WENV170076100
CDZT01056093
303305
Verrucomicrobiota
GGC
Ala
>WENV170076016
CDZT01052901
8938
Verrucomicrobiota
GCT
Ser
>WENV170074777
CDZT01007766
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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