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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
126 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170077793
CDZU01041725
117741
Bacteroidota
TAG
Leu
>WENV170077776
CDZU01040960
404226
Bacteroidota
CCT
Arg
>WENV170076473
CDZU01004681
175904
Bacteroidota
CGG
Pro
>WENV170076544
CDZU01006625
175904
Bacteroidota
CGG
Pro
>WENV170076577
CDZU01007433
289031
Bacteroidota
CAT
Met
>WENV170076640
CDZU01009045
289031
Bacteroidota
CAT
Met
>WENV170076676
CDZU01010041
280557
Bacteroidota
CAT
Met
>WENV170077120
CDZU01022615
280557
Bacteroidota
CAT
Met
>WENV170077194
CDZU01024128
280557
Bacteroidota
CAT
Met
>WENV170077370
CDZU01029822
20206
Bacteroidota
GGA
Ser
>WENV170076461
CDZU01004270
483416
Bacteroidota
CTG
Gln
>WENV170076332
CDZU01000371
483416
Bacteroidota
CTG
Gln
>WENV170076426
CDZU01002917
282712
Bacteroidota
TTT
Lys
>WENV170076969
CDZU01018329
398871
Bacteroidota
TTC
Glu
>WENV170077678
CDZU01038193
201819
Bacteroidota
CAT
Met
>WENV170076826
CDZU01014000
201819
Bacteroidota
CAT
Met
>WENV170077631
CDZU01036676
56493
Bacteroidota
TGA
Ser
>WENV170077384
CDZU01030879
56493
Bacteroidota
TGA
Ser
>WENV170076481
CDZU01004706
56493
Bacteroidota
TGA
Ser
>WENV170077544
CDZU01034179
175906
Bacteroidota
GTG
His
>WENV170077543
CDZU01034179
175906
Bacteroidota
GTG
His
>WENV170077436
CDZU01032389
175903
Bacteroidota
GTG
His
>WENV170077554
CDZU01034546
351598
Bacteroidota
CGG
Pro
>WENV170077513
CDZU01033867
351598
Bacteroidota
CGG
Pro
>WENV170077234
CDZU01025324
351598
Bacteroidota
CGG
Pro
>WENV170076724
CDZU01010949
351598
Bacteroidota
CGG
Pro
>WENV170076488
CDZU01004769
351598
Bacteroidota
CGG
Pro
>WENV170077847
CDZU01044828
118089
Bacteroidota
TAG
Leu
>WENV170077752
CDZU01040276
203954
Bacteroidota
GTC
Asp
>WENV170077534
CDZU01034160
203954
Bacteroidota
GTC
Asp
>WENV170077021
CDZU01019255
203954
Bacteroidota
GTC
Asp
>WENV170076551
CDZU01006712
178907
Bacteroidota
TCT
Arg
>WENV170077147
CDZU01023337
172085
Bacteroidota
TAC
Val
>WENV170077148
CDZU01023337
172085
Bacteroidota
TAC
Val
>WENV170077149
CDZU01023337
172085
Bacteroidota
TAC
Val
>WENV170077004
CDZU01018945
405877
Bacteroidota
GGT
Thr
>WENV170076678
CDZU01010046
29791
Bacteroidota
GCT
Ser
>WENV170076972
CDZU01018410
182267
Bacteroidota
GTT
Asn
>WENV170076971
CDZU01018410
182267
Bacteroidota
GTT
Asn
>WENV170076970
CDZU01018410
182267
Bacteroidota
GTT
Asn
>WENV170077532
CDZU01034133
20449
Bacteroidota
GGA
Ser
>WENV170076964
CDZU01018075
21127
Bacteroidota
GGA
Ser
>WENV170076642
CDZU01009271
21127
Bacteroidota
GGA
Ser
>WENV170077747
CDZU01040275
56072
Bacteroidota
TAA
Leu
>WENV170076448
CDZU01003556
56072
Bacteroidota
TAA
Leu
>WENV170076843
CDZU01014620
175886
Bacteroidota
GGC
Ala
>WENV170077658
CDZU01037792
175902
Bacteroidota
GGC
Ala
>WENV170076402
CDZU01002202
175902
Bacteroidota
GGC
Ala
>WENV170076844
CDZU01014620
179697
Bacteroidota
TGT
Thr
>WENV170076679
CDZU01010046
398860
Bacteroidota
CTC
Glu
>WENV170077736
CDZU01039951
174201
Bacteroidota
GGG
Pro
>WENV170077180
CDZU01023744
174201
Bacteroidota
GGG
Pro
>WENV170077064
CDZU01020390
174201
Bacteroidota
GGG
Pro
>WENV170076386
CDZU01002132
174201
Bacteroidota
GGG
Pro
>WENV170076940
CDZU01017418
280451
Bacteroidota
CGT
Thr
>WENV170076413
CDZU01002590
280451
Bacteroidota
CGT
Thr
>WENV170076491
CDZU01005054
418894
Bacteroidota
TTC
Glu
>WENV170076490
CDZU01005054
418894
Bacteroidota
TTC
Glu
>WENV170076485
CDZU01004713
418894
Bacteroidota
TTC
Glu
>WENV170076484
CDZU01004713
418894
Bacteroidota
TTC
Glu
>WENV170076721
CDZU01010949
99847
Bacteroidota
GTA
Tyr
>WENV170076919
CDZU01016977
99847
Bacteroidota
GTA
Tyr
>WENV170077174
CDZU01023738
99847
Bacteroidota
GTA
Tyr
>WENV170077623
CDZU01036360
99847
Bacteroidota
GTA
Tyr
>WENV170077457
CDZU01032754
399200
Bacteroidota
CAT
Met
>WENV170077262
CDZU01026542
399200
Bacteroidota
CAT
Met
>WENV170076755
CDZU01012185
399200
Bacteroidota
CAT
Met
>WENV170077526
CDZU01033997
186874
Bacteroidota
CAT
Met
>WENV170077244
CDZU01025747
186874
Bacteroidota
CAT
Met
>WENV170076814
CDZU01013899
186874
Bacteroidota
CAT
Met
>WENV170077065
CDZU01020390
488746
Bacteroidota
CTG
Gln
>WENV170077738
CDZU01039951
488746
Bacteroidota
CTG
Gln
>WENV170077499
CDZU01033531
280478
Bacteroidota
GCC
Gly
>WENV170077497
CDZU01033531
280478
Bacteroidota
GCC
Gly
>WENV170077287
CDZU01027581
280478
Bacteroidota
GCC
Gly
>WENV170077058
CDZU01020355
280478
Bacteroidota
GCC
Gly
>WENV170077066
CDZU01020390
27524
Bacteroidota
GGA
Ser
>WENV170077471
CDZU01032803
186108
Bacteroidota
GTT
Asn
>WENV170077462
CDZU01032786
186108
Bacteroidota
GTT
Asn
>WENV170077270
CDZU01026888
73011
Bacteroidota
CAA
Leu
>WENV170077598
CDZU01035702
280515
Bacteroidota
CCA
Trp
>WENV170077764
CDZU01040464
183889
Bacteroidota
GGC
Ala
>WENV170077645
CDZU01037167
183889
Bacteroidota
GGC
Ala
>WENV170077122
CDZU01022622
183889
Bacteroidota
GGC
Ala
>WENV170076929
CDZU01017197
186142
Bacteroidota
GAT
Ile
>WENV170077783
CDZU01041340
398828
Bacteroidota
CCG
Arg
>WENV170077203
CDZU01024140
398828
Bacteroidota
CCG
Arg
>WENV170076888
CDZU01016220
74084
Bacteroidota
CAG
Leu
>WENV170077368
CDZU01029809
140771
Bacteroidota
>WENV170077283
CDZU01027295
140771
Bacteroidota
>WENV170076527
CDZU01005717
140771
Bacteroidota
>WENV170076351
CDZU01001031
140771
Bacteroidota
>WENV170076619
CDZU01008580
176192
Bacteroidota
TCT
Arg
>WENV170076342
CDZU01000815
176192
Bacteroidota
TCT
Arg
>WENV170077530
CDZU01034133
400088
Bacteroidota
GGT
Thr
>WENV170077647
CDZU01037168
69204
Bacteroidota
TGA
Ser
>WENV170077470
CDZU01032790
69204
Bacteroidota
TGA
Ser
>WENV170076740
CDZU01011504
69204
Bacteroidota
TGA
Ser
>WENV170076636
CDZU01008967
69204
Bacteroidota
TGA
Ser
>WENV170077737
CDZU01039951
280446
Bacteroidota
TTT
Lys
>WENV170077243
CDZU01025740
280446
Bacteroidota
TTT
Lys
>WENV170076385
CDZU01002130
280446
Bacteroidota
TTT
Lys
>WENV170076865
CDZU01015230
484496
Bacteroidota
TTG
Gln
>WENV170077636
CDZU01036835
484496
Bacteroidota
TTG
Gln
>WENV170077773
CDZU01040943
484496
Bacteroidota
TTG
Gln
>WENV170077704
CDZU01038866
27502
Bacteroidota
GGA
Ser
>WENV170077156
CDZU01023426
27502
Bacteroidota
GGA
Ser
>WENV170077111
CDZU01022047
27502
Bacteroidota
GGA
Ser
>WENV170076601
CDZU01008190
27502
Bacteroidota
GGA
Ser
>WENV170077458
CDZU01032754
285750
Bacteroidota
CCC
Gly
>WENV170076614
CDZU01008575
373714
Bacteroidota
GCC
Gly
>WENV170076613
CDZU01008575
373714
Bacteroidota
GCC
Gly
>WENV170076612
CDZU01008575
373714
Bacteroidota
GCC
Gly
>WENV170076492
CDZU01005061
373714
Bacteroidota
GCC
Gly
>WENV170076930
CDZU01017197
186143
Bacteroidota
TGC
Ala
>WENV170076457
CDZU01003925
365112
Bacteroidota
TTT
Lys
>WENV170076677
CDZU01010046
365112
Bacteroidota
TTT
Lys
>WENV170077325
CDZU01028646
365112
Bacteroidota
TTT
Lys
>WENV170077794
CDZU01041743
365112
Bacteroidota
TTT
Lys
>WENV170077807
CDZU01042094
398836
Bacteroidota
GCA
Cys
>WENV170077775
CDZU01040947
398836
Bacteroidota
GCA
Cys
>WENV170077552
CDZU01034546
398836
Bacteroidota
GCA
Cys
>WENV170077158
CDZU01023443
398836
Bacteroidota
GCA
Cys
>WENV170077124
CDZU01022853
398836
Bacteroidota
GCA
Cys
>WENV170077028
CDZU01019322
398836
Bacteroidota
GCA
Cys
>WENV170076661
CDZU01009690
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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