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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170078663
CDZV01034349
117741
Bacteroidota
TAG
Leu
>WENV170078203
CDZV01013573
175904
Bacteroidota
CGG
Pro
>WENV170079092
CDZV01051748
175904
Bacteroidota
CGG
Pro
>WENV170078076
CDZV01009185
289031
Bacteroidota
CAT
Met
>WENV170078365
CDZV01021489
289031
Bacteroidota
CAT
Met
>WENV170078287
CDZV01016438
280557
Bacteroidota
CAT
Met
>WENV170078064
CDZV01008228
20206
Bacteroidota
GGA
Ser
>WENV170078833
CDZV01041218
483416
Bacteroidota
CTG
Gln
>WENV170078667
CDZV01034719
483416
Bacteroidota
CTG
Gln
>WENV170078063
CDZV01008227
282712
Bacteroidota
TTT
Lys
>WENV170078025
CDZV01006775
175906
Bacteroidota
GTG
His
>WENV170078024
CDZV01006775
175906
Bacteroidota
GTG
His
>WENV170079147
CDZV01053578
175903
Bacteroidota
GTG
His
>WENV170078250
CDZV01015254
351598
Bacteroidota
CGG
Pro
>WENV170078344
CDZV01020443
351598
Bacteroidota
CGG
Pro
>WENV170079171
CDZV01054993
351598
Bacteroidota
CGG
Pro
>WENV170079246
CDZV01057685
351598
Bacteroidota
CGG
Pro
>WENV170078331
CDZV01019976
118089
Bacteroidota
TAG
Leu
>WENV170078236
CDZV01014697
203954
Bacteroidota
GTC
Asp
>WENV170078196
CDZV01013562
405877
Bacteroidota
GGT
Thr
>WENV170078292
CDZV01016859
29791
Bacteroidota
GCT
Ser
>WENV170078113
CDZV01010223
182267
Bacteroidota
GTT
Asn
>WENV170077965
CDZV01003305
21127
Bacteroidota
GGA
Ser
>WENV170079143
CDZV01053160
56072
Bacteroidota
TAA
Leu
>WENV170078028
CDZV01007274
57807
Bacteroidota
TGA
Ser
>WENV170079066
CDZV01050419
57807
Bacteroidota
TGA
Ser
>WENV170078454
CDZV01025747
175886
Bacteroidota
GGC
Ala
>WENV170078660
CDZV01034025
175902
Bacteroidota
GGC
Ala
>WENV170078217
CDZV01014253
175902
Bacteroidota
GGC
Ala
>WENV170078110
CDZV01010192
179697
Bacteroidota
TGT
Thr
>WENV170078254
CDZV01015540
398860
Bacteroidota
CTC
Glu
>WENV170078362
CDZV01021411
280451
Bacteroidota
CGT
Thr
>WENV170078571
CDZV01031366
418894
Bacteroidota
TTC
Glu
>WENV170078570
CDZV01031366
418894
Bacteroidota
TTC
Glu
>WENV170078446
CDZV01025692
99847
Bacteroidota
GTA
Tyr
>WENV170078916
CDZV01043695
399200
Bacteroidota
CAT
Met
>WENV170078360
CDZV01021042
399200
Bacteroidota
CAT
Met
>WENV170078595
CDZV01031901
186874
Bacteroidota
CAT
Met
>WENV170077995
CDZV01004883
186874
Bacteroidota
CAT
Met
>WENV170078330
CDZV01019968
332896
Bacteroidota
TTT
Lys
>WENV170077905
CDZV01001815
332896
Bacteroidota
TTT
Lys
>WENV170079215
CDZV01056739
488746
Bacteroidota
CTG
Gln
>WENV170079303
CDZV01060497
280478
Bacteroidota
GCC
Gly
>WENV170078319
CDZV01018694
280478
Bacteroidota
GCC
Gly
>WENV170078268
CDZV01016037
280478
Bacteroidota
GCC
Gly
>WENV170078054
CDZV01007779
280478
Bacteroidota
GCC
Gly
>WENV170077891
CDZV01001359
280478
Bacteroidota
GCC
Gly
>WENV170077889
CDZV01001359
280478
Bacteroidota
GCC
Gly
>WENV170079107
CDZV01051877
280515
Bacteroidota
CCA
Trp
>WENV170077876
CDZV01000900
183889
Bacteroidota
GGC
Ala
>WENV170078161
CDZV01012199
158068
Bacteroidota
GGG
Pro
>WENV170078805
CDZV01040003
398828
Bacteroidota
CCG
Arg
>WENV170078212
CDZV01014048
74084
Bacteroidota
CAG
Leu
>WENV170078942
CDZV01044362
480325
Bacteroidota
CTG
Gln
>WENV170078354
CDZV01020932
176192
Bacteroidota
TCT
Arg
>WENV170078477
CDZV01026726
176192
Bacteroidota
TCT
Arg
>WENV170078105
CDZV01009975
400088
Bacteroidota
GGT
Thr
>WENV170079089
CDZV01051699
484496
Bacteroidota
TTG
Gln
>WENV170078091
CDZV01009587
484496
Bacteroidota
TTG
Gln
>WENV170078117
CDZV01010607
186143
Bacteroidota
TGC
Ala
>WENV170078662
CDZV01034278
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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