This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170078554
CDZV01030502
406043
Verrucomicrobiota
GCA
Cys
>WENV170078651
CDZV01033847
293125
Verrucomicrobiota
GAA
Phe
>WENV170078781
CDZV01038766
293125
Verrucomicrobiota
GAA
Phe
>WENV170078743
CDZV01036671
406350
Verrucomicrobiota
TGT
Thr
>WENV170078646
CDZV01033847
148006
Verrucomicrobiota
CAA
Leu
>WENV170078087
CDZV01009187
293105
Verrucomicrobiota
CAT
Met
>WENV170079042
CDZV01048226
405901
Verrucomicrobiota
GCC
Gly
>WENV170078779
CDZV01038765
405901
Verrucomicrobiota
GCC
Gly
>WENV170078452
CDZV01025716
405901
Verrucomicrobiota
GCC
Gly
>WENV170078784
CDZV01038766
483642
Verrucomicrobiota
CCC
Gly
>WENV170078649
CDZV01033847
483642
Verrucomicrobiota
CCC
Gly
>WENV170078357
CDZV01020934
229220
Verrucomicrobiota
CAT
Met
>WENV170079302
CDZV01060162
157427
Verrucomicrobiota
GTC
Asp
>WENV170078363
CDZV01021487
157427
Verrucomicrobiota
GTC
Asp
>WENV170078744
CDZV01036671
293079
Verrucomicrobiota
CGC
Ala
>WENV170078647
CDZV01033847
120352
Verrucomicrobiota
TAG
Leu
>WENV170078780
CDZV01038766
489412
Verrucomicrobiota
TCC
Gly
>WENV170078650
CDZV01033847
489412
Verrucomicrobiota
TCC
Gly
>WENV170078996
CDZV01046853
293069
Verrucomicrobiota
CTT
Lys
>WENV170078995
CDZV01046853
293069
Verrucomicrobiota
CTT
Lys
>WENV170078994
CDZV01046853
293069
Verrucomicrobiota
CTT
Lys
>WENV170078013
CDZV01005814
293069
Verrucomicrobiota
CTT
Lys
>WENV170078012
CDZV01005814
293069
Verrucomicrobiota
CTT
Lys
>WENV170078011
CDZV01005814
293069
Verrucomicrobiota
CTT
Lys
>WENV170078653
CDZV01033847
406336
Verrucomicrobiota
CCT
Arg
>WENV170078794
CDZV01039230
406369
Verrucomicrobiota
CCG
Arg
>WENV170078397
CDZV01022863
405940
Verrucomicrobiota
GGT
Thr
>WENV170079043
CDZV01048227
406044
Verrucomicrobiota
CTG
Gln
>WENV170078648
CDZV01033847
187556
Verrucomicrobiota
GGG
Pro
>WENV170078783
CDZV01038766
187556
Verrucomicrobiota
GGG
Pro
>WENV170078086
CDZV01009187
406037
Verrucomicrobiota
GTG
His
>WENV170078048
CDZV01007702
406360
Verrucomicrobiota
GAC
Val
>WENV170078293
CDZV01016880
187548
Verrucomicrobiota
TCT
Arg
>WENV170078010
CDZV01005814
406040
Verrucomicrobiota
CGT
Thr
>WENV170078049
CDZV01007702
57652
Verrucomicrobiota
TGA
Ser
>WENV170078099
CDZV01009718
406039
Verrucomicrobiota
CAC
Val
>WENV170078985
CDZV01045906
406368
Verrucomicrobiota
TTG
Gln
>WENV170078253
CDZV01015503
101461
Verrucomicrobiota
GTA
Tyr
>WENV170078597
CDZV01031903
293095
Verrucomicrobiota
TTT
Lys
>WENV170078014
CDZV01005814
187561
Verrucomicrobiota
CGG
Pro
>WENV170078778
CDZV01038765
406342
Verrucomicrobiota
CAT
Met
>WENV170078252
CDZV01015503
406351
Verrucomicrobiota
GTT
Asn
>WENV170078986
CDZV01045906
303305
Verrucomicrobiota
GGC
Ala
>WENV170079238
CDZV01057221
8938
Verrucomicrobiota
GCT
Ser
>WENV170078782
CDZV01038766
186928
Verrucomicrobiota
TGG
Pro
>WENV170078652
CDZV01033847
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK