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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170082294
CDZY01047142
176499
Actinomycetota
CAT
Met
>WENV170081714
CDZY01025624
147806
Actinomycetota
TAA
Leu
>WENV170081258
CDZY01010721
280498
Actinomycetota
GTT
Asn
>WENV170082174
CDZY01042314
280498
Actinomycetota
GTT
Asn
>WENV170082175
CDZY01042314
280498
Actinomycetota
GTT
Asn
>WENV170082176
CDZY01042314
280498
Actinomycetota
GTT
Asn
>WENV170082177
CDZY01042314
280498
Actinomycetota
GTT
Asn
>WENV170082330
CDZY01048685
280498
Actinomycetota
GTT
Asn
>WENV170081125
CDZY01005137
140768
Actinomycetota
TAG
Leu
>WENV170081694
CDZY01025021
175837
Actinomycetota
ACG
Arg
>WENV170081723
CDZY01025988
280524
Actinomycetota
TGC
Ala
>WENV170082458
CDZY01053981
280523
Actinomycetota
GGC
Ala
>WENV170081724
CDZY01025988
280523
Actinomycetota
GGC
Ala
>WENV170082275
CDZY01046031
280450
Actinomycetota
TTT
Lys
>WENV170081014
CDZY01000519
56166
Actinomycetota
TGA
Ser
>WENV170081045
CDZY01001977
358727
Actinomycetota
CCG
Arg
>WENV170081016
CDZY01000713
480329
Actinomycetota
CCC
Gly
>WENV170082100
CDZY01038489
175882
Actinomycetota
TGG
Pro
>WENV170081577
CDZY01020145
480319
Actinomycetota
TTG
Gln
>WENV170082087
CDZY01037780
280489
Actinomycetota
CTC
Glu
>WENV170081346
CDZY01012802
280499
Actinomycetota
CCT
Arg
>WENV170082088
CDZY01037780
398853
Actinomycetota
CTG
Gln
>WENV170081788
CDZY01028265
176642
Actinomycetota
CAA
Leu
>WENV170082289
CDZY01046703
237585
Actinomycetota
TAC
Val
>WENV170081787
CDZY01028239
46642
Actinomycetota
CGA
Ser
>WENV170081062
CDZY01002875
104211
Actinomycetota
CAG
Leu
>WENV170082293
CDZY01047142
117903
Actinomycetota
GTA
Tyr
>WENV170081124
CDZY01005137
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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