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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170098159
CEAN01000991
117741
Bacteroidota
TAG
Leu
>WENV170098281
CEAN01004032
117741
Bacteroidota
TAG
Leu
>WENV170098443
CEAN01007489
117741
Bacteroidota
TAG
Leu
>WENV170098606
CEAN01011322
398829
Bacteroidota
CCT
Arg
>WENV170098678
CEAN01013198
398829
Bacteroidota
CCT
Arg
>WENV170098488
CEAN01008195
175838
Bacteroidota
GTT
Asn
>WENV170098600
CEAN01011150
175838
Bacteroidota
GTT
Asn
>WENV170098601
CEAN01011150
175838
Bacteroidota
GTT
Asn
>WENV170098529
CEAN01009027
280557
Bacteroidota
CAT
Met
>WENV170098522
CEAN01008864
20206
Bacteroidota
GGA
Ser
>WENV170098552
CEAN01009983
20206
Bacteroidota
GGA
Ser
>WENV170098429
CEAN01007154
201819
Bacteroidota
CAT
Met
>WENV170098280
CEAN01004031
56493
Bacteroidota
TGA
Ser
>WENV170098512
CEAN01008604
175903
Bacteroidota
GTG
His
>WENV170098140
CEAN01000392
398872
Bacteroidota
GGT
Thr
>WENV170098266
CEAN01003150
175936
Bacteroidota
CAT
Met
>WENV170098557
CEAN01010304
29791
Bacteroidota
GCT
Ser
>WENV170098441
CEAN01007420
56072
Bacteroidota
TAA
Leu
>WENV170098364
CEAN01005978
57807
Bacteroidota
TGA
Ser
>WENV170098576
CEAN01010755
57807
Bacteroidota
TGA
Ser
>WENV170098577
CEAN01010755
57807
Bacteroidota
TGA
Ser
>WENV170098578
CEAN01010756
175902
Bacteroidota
GGC
Ala
>WENV170098201
CEAN01001790
175902
Bacteroidota
GGC
Ala
>WENV170098558
CEAN01010304
398860
Bacteroidota
CTC
Glu
>WENV170098393
CEAN01006496
480404
Bacteroidota
TTG
Gln
>WENV170098137
CEAN01000342
280451
Bacteroidota
CGT
Thr
>WENV170098603
CEAN01011150
99847
Bacteroidota
GTA
Tyr
>WENV170098543
CEAN01009497
99847
Bacteroidota
GTA
Tyr
>WENV170098391
CEAN01006475
99847
Bacteroidota
GTA
Tyr
>WENV170098293
CEAN01004675
488746
Bacteroidota
CTG
Gln
>WENV170098428
CEAN01007150
399026
Bacteroidota
CCT
Arg
>WENV170098575
CEAN01010754
175844
Bacteroidota
GGC
Ala
>WENV170098489
CEAN01008197
280532
Bacteroidota
>WENV170098694
CEAN01013488
480318
Bacteroidota
CTG
Gln
>WENV170098692
CEAN01013488
158068
Bacteroidota
GGG
Pro
>WENV170098481
CEAN01008021
158068
Bacteroidota
GGG
Pro
>WENV170098294
CEAN01004675
158068
Bacteroidota
GGG
Pro
>WENV170098241
CEAN01002807
158068
Bacteroidota
GGG
Pro
>WENV170098683
CEAN01013200
398828
Bacteroidota
CCG
Arg
>WENV170098503
CEAN01008587
140771
Bacteroidota
>WENV170098211
CEAN01002056
140771
Bacteroidota
>WENV170098359
CEAN01005866
176192
Bacteroidota
TCT
Arg
>WENV170098693
CEAN01013488
280446
Bacteroidota
TTT
Lys
>WENV170098403
CEAN01006867
280446
Bacteroidota
TTT
Lys
>WENV170098325
CEAN01005320
280446
Bacteroidota
TTT
Lys
>WENV170098240
CEAN01002783
280446
Bacteroidota
TTT
Lys
>WENV170098175
CEAN01001320
484496
Bacteroidota
TTG
Gln
>WENV170098188
CEAN01001483
484496
Bacteroidota
TTG
Gln
>WENV170098433
CEAN01007253
484496
Bacteroidota
TTG
Gln
>WENV170098405
CEAN01006871
117804
Bacteroidota
TAG
Leu
>WENV170098313
CEAN01005126
398836
Bacteroidota
GCA
Cys
>WENV170098228
CEAN01002285
398836
Bacteroidota
GCA
Cys
>WENV170098222
CEAN01002061
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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