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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170101094
CEAR01019187
229015
Bacillota
GTG
His
>WENV170101234
CEAR01025339
280492
Bacillota
CTT
Lys
>WENV170101307
CEAR01028132
175842
Bacillota
CAC
Val
>WENV170101851
CEAR01050525
323166
Bacillota
TAC
Val
>WENV170101424
CEAR01031680
176018
Bacillota
CAT
Met
>WENV170100898
CEAR01010533
215243
Bacillota
CAT
Met
>WENV170101848
CEAR01050508
73664
Bacillota
CAG
Leu
>WENV170101438
CEAR01032703
280447
Bacillota
GAC
Val
>WENV170100757
CEAR01003094
175859
Bacillota
TCT
Arg
>WENV170101142
CEAR01021711
175831
Bacillota
ACG
Arg
>WENV170101970
CEAR01056635
346451
Bacillota
TTT
Lys
>WENV170100853
CEAR01007577
480322
Bacillota
CTG
Gln
>WENV170101511
CEAR01035102
175868
Bacillota
GTT
Asn
>WENV170100733
CEAR01002289
398854
Bacillota
CTC
Glu
>WENV170101254
CEAR01026048
291576
Bacillota
CCC
Gly
>WENV170100848
CEAR01007191
291576
Bacillota
CCC
Gly
>WENV170101908
CEAR01052598
480324
Bacillota
TTG
Gln
>WENV170101353
CEAR01030165
303718
Bacillota
TGT
Thr
>WENV170101155
CEAR01022058
303718
Bacillota
TGT
Thr
>WENV170101302
CEAR01027719
56079
Bacillota
AAG
Leu
>WENV170101917
CEAR01053514
117745
Bacillota
GTA
Tyr
>WENV170102006
CEAR01058578
342104
Bacillota
TAC
Val
>WENV170101509
CEAR01035100
342104
Bacillota
TAC
Val
>WENV170100875
CEAR01008684
342104
Bacillota
TAC
Val
>WENV170100689
CEAR01000894
179755
Bacillota
CCG
Arg
>WENV170101250
CEAR01025766
398832
Bacillota
TTC
Glu
>WENV170101055
CEAR01017248
280462
Bacillota
GAA
Phe
>WENV170100999
CEAR01014401
280462
Bacillota
GAA
Phe
>WENV170102034
CEAR01059947
398852
Bacillota
CTC
Glu
>WENV170101681
CEAR01041903
398852
Bacillota
CTC
Glu
>WENV170101658
CEAR01040891
398852
Bacillota
CTC
Glu
>WENV170101350
CEAR01030115
398852
Bacillota
CTC
Glu
>WENV170101601
CEAR01038918
398833
Bacillota
TGT
Thr
>WENV170102015
CEAR01058593
280463
Bacillota
TTT
Lys
>WENV170101287
CEAR01027225
56074
Bacillota
TGA
Ser
>WENV170102004
CEAR01058518
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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