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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170106949
CEBY01022587
99852
Bacillota
GTA
Tyr
>WENV170107922
CEBY01065346
234991
Bacillota
GAT
Ile
>WENV170106838
CEBY01017023
280500
Bacillota
TGC
Ala
>WENV170107416
CEBY01041506
349107
Bacillota
GCC
Gly
>WENV170106992
CEBY01024606
179917
Bacillota
CAT
Met
>WENV170107521
CEBY01045768
175842
Bacillota
CAC
Val
>WENV170106908
CEBY01020574
175842
Bacillota
CAC
Val
>WENV170106701
CEBY01009828
175842
Bacillota
CAC
Val
>WENV170107676
CEBY01052743
291629
Bacillota
CCA
Trp
>WENV170107090
CEBY01029380
348419
Bacillota
GTT
Asn
>WENV170107787
CEBY01058410
190476
Bacillota
CAT
Met
>WENV170106580
CEBY01004305
73664
Bacillota
CAG
Leu
>WENV170107474
CEBY01043598
280447
Bacillota
GAC
Val
>WENV170107459
CEBY01043176
280447
Bacillota
GAC
Val
>WENV170107026
CEBY01026604
280447
Bacillota
GAC
Val
>WENV170107024
CEBY01026578
280447
Bacillota
GAC
Val
>WENV170107545
CEBY01047004
280447
Bacillota
GAC
Val
>WENV170107834
CEBY01061429
5692
Bacillota
GCT
Ser
>WENV170106888
CEBY01019272
312274
Bacillota
GGC
Ala
>WENV170107674
CEBY01052743
186123
Bacillota
GTC
Asp
>WENV170106989
CEBY01024606
284723
Bacillota
TAC
Val
>WENV170106598
CEBY01005845
284723
Bacillota
TAC
Val
>WENV170106596
CEBY01005845
284723
Bacillota
TAC
Val
>WENV170107547
CEBY01047271
73009
Bacillota
CAG
Leu
>WENV170106564
CEBY01003836
73009
Bacillota
CAG
Leu
>WENV170106915
CEBY01021039
189473
Bacillota
GAT
Ile
>WENV170107259
CEBY01035674
291581
Bacillota
CGG
Pro
>WENV170107012
CEBY01025625
175859
Bacillota
TCT
Arg
>WENV170107348
CEBY01037949
175859
Bacillota
TCT
Arg
>WENV170107489
CEBY01044057
175859
Bacillota
TCT
Arg
>WENV170106568
CEBY01004256
175831
Bacillota
ACG
Arg
>WENV170106677
CEBY01008454
175831
Bacillota
ACG
Arg
>WENV170106812
CEBY01015479
332181
Bacillota
TGT
Thr
>WENV170107247
CEBY01035210
346451
Bacillota
TTT
Lys
>WENV170107212
CEBY01033011
346451
Bacillota
TTT
Lys
>WENV170107574
CEBY01048586
480322
Bacillota
CTG
Gln
>WENV170107526
CEBY01045956
480322
Bacillota
CTG
Gln
>WENV170107239
CEBY01034700
480322
Bacillota
CTG
Gln
>WENV170107173
CEBY01031805
480322
Bacillota
CTG
Gln
>WENV170107019
CEBY01026052
480322
Bacillota
CTG
Gln
>WENV170107030
CEBY01026616
175868
Bacillota
GTT
Asn
>WENV170106987
CEBY01024322
175868
Bacillota
GTT
Asn
>WENV170106541
CEBY01003047
175868
Bacillota
GTT
Asn
>WENV170107136
CEBY01030281
398854
Bacillota
CTC
Glu
>WENV170106670
CEBY01008344
398854
Bacillota
CTC
Glu
>WENV170107582
CEBY01048846
291576
Bacillota
CCC
Gly
>WENV170107002
CEBY01024992
291576
Bacillota
CCC
Gly
>WENV170107500
CEBY01044746
291576
Bacillota
CCC
Gly
>WENV170107512
CEBY01045293
480324
Bacillota
TTG
Gln
>WENV170107227
CEBY01034085
480324
Bacillota
TTG
Gln
>WENV170106968
CEBY01023701
480324
Bacillota
TTG
Gln
>WENV170106988
CEBY01024606
175899
Bacillota
GTC
Asp
>WENV170107037
CEBY01026626
303718
Bacillota
TGT
Thr
>WENV170106592
CEBY01005425
56079
Bacillota
AAG
Leu
>WENV170106937
CEBY01022129
323864
Bacillota
TGC
Ala
>WENV170107782
CEBY01057977
117745
Bacillota
GTA
Tyr
>WENV170107543
CEBY01046795
280444
Bacillota
GGT
Thr
>WENV170107476
CEBY01043653
280444
Bacillota
GGT
Thr
>WENV170107063
CEBY01028203
280444
Bacillota
GGT
Thr
>WENV170107023
CEBY01026524
280444
Bacillota
GGT
Thr
>WENV170107043
CEBY01027171
342104
Bacillota
TAC
Val
>WENV170107568
CEBY01048202
223045
Bacillota
GAT
Ile
>WENV170107694
CEBY01054213
179755
Bacillota
CCG
Arg
>WENV170107657
CEBY01052326
179755
Bacillota
CCG
Arg
>WENV170106733
CEBY01011916
179755
Bacillota
CCG
Arg
>WENV170107923
CEBY01065346
291650
Bacillota
TGC
Ala
>WENV170107788
CEBY01058410
398832
Bacillota
TTC
Glu
>WENV170106897
CEBY01019779
398832
Bacillota
TTC
Glu
>WENV170106892
CEBY01019739
398832
Bacillota
TTC
Glu
>WENV170107056
CEBY01027744
398852
Bacillota
CTC
Glu
>WENV170106815
CEBY01015479
289123
Bacillota
GGT
Thr
>WENV170107781
CEBY01057963
398833
Bacillota
TGT
Thr
>WENV170107229
CEBY01034091
280463
Bacillota
TTT
Lys
>WENV170107675
CEBY01052743
405393
Bacillota
GCC
Gly
>WENV170107067
CEBY01028293
405393
Bacillota
GCC
Gly
>WENV170106553
CEBY01003723
405393
Bacillota
GCC
Gly
>WENV170107711
CEBY01054801
280473
Bacillota
TGG
Pro
>WENV170106774
CEBY01012970
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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