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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170113736
CENF01100997
424450
Alphaproteobacteria
GGT
Thr
>WENV170114457
CENF01191296
29841
Alphaproteobacteria
GGA
Ser
>WENV170112867
CENF01016720
197241
Alphaproteobacteria
GGG
Pro
>WENV170113115
CENF01037355
481268
Alphaproteobacteria
TCC
Gly
>WENV170113118
CENF01037596
481268
Alphaproteobacteria
TCC
Gly
>WENV170113563
CENF01081350
280788
Alphaproteobacteria
TTT
Lys
>WENV170113610
CENF01085720
193088
Alphaproteobacteria
GAT
Ile
>WENV170114218
CENF01161205
487436
Alphaproteobacteria
TCC
Gly
>WENV170112744
CENF01003750
281659
Alphaproteobacteria
TGC
Ala
>WENV170112919
CENF01020811
281659
Alphaproteobacteria
TGC
Ala
>WENV170114894
CENF01254782
305403
Alphaproteobacteria
>WENV170114105
CENF01148439
305403
Alphaproteobacteria
>WENV170113755
CENF01102809
179388
Alphaproteobacteria
GTG
His
>WENV170113555
CENF01080710
178503
Alphaproteobacteria
GGG
Pro
>WENV170114222
CENF01161282
400544
Alphaproteobacteria
GGT
Thr
>WENV170112834
CENF01012972
400544
Alphaproteobacteria
GGT
Thr
>WENV170114455
CENF01191269
400544
Alphaproteobacteria
GGT
Thr
>WENV170114557
CENF01200787
281650
Alphaproteobacteria
CCA
Trp
>WENV170112765
CENF01006398
118213
Alphaproteobacteria
TAG
Leu
>WENV170112837
CENF01013928
212319
Alphaproteobacteria
GTG
His
>WENV170113340
CENF01059276
488318
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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