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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170115338
CENG01013283
20664
Gammaproteobacteria
GCT
Ser
>WENV170115339
CENG01013283
232119
Gammaproteobacteria
ACG
Arg
>WENV170115340
CENG01013283
232119
Gammaproteobacteria
ACG
Arg
>WENV170115384
CENG01016334
401684
Gammaproteobacteria
CCT
Arg
>WENV170115569
CENG01028788
180680
Gammaproteobacteria
GAC
Val
>WENV170115572
CENG01029339
282018
Gammaproteobacteria
TGT
Thr
>WENV170115728
CENG01042942
183804
Gammaproteobacteria
CAT
Met
>WENV170115810
CENG01050785
74048
Gammaproteobacteria
CAA
Leu
>WENV170115821
CENG01051925
20618
Gammaproteobacteria
GGA
Ser
>WENV170115886
CENG01058319
282902
Gammaproteobacteria
TGT
Thr
>WENV170115955
CENG01066352
297858
Gammaproteobacteria
TGC
Ala
>WENV170116006
CENG01074110
488965
Gammaproteobacteria
GCA
Cys
>WENV170116035
CENG01077048
281939
Gammaproteobacteria
TTT
Lys
>WENV170116211
CENG01098527
186591
Gammaproteobacteria
ACG
Arg
>WENV170116217
CENG01099654
334421
Gammaproteobacteria
TGT
Thr
>WENV170116673
CENG01196242
56694
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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