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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170117340
CENJ01006893
399000
Alphaproteobacteria
TTC
Glu
>WENV170117424
CENJ01011269
192131
Alphaproteobacteria
GTC
Asp
>WENV170117440
CENJ01011910
100184
Alphaproteobacteria
CAG
Leu
>WENV170117449
CENJ01012243
424450
Alphaproteobacteria
GGT
Thr
>WENV170117536
CENJ01016160
281659
Alphaproteobacteria
TGC
Ala
>WENV170117572
CENJ01017503
201940
Alphaproteobacteria
CAT
Met
>WENV170117590
CENJ01018499
400515
Alphaproteobacteria
GAC
Val
>WENV170117694
CENJ01024465
398994
Alphaproteobacteria
GTT
Asn
>WENV170117727
CENJ01026194
427428
Alphaproteobacteria
GCC
Gly
>WENV170117779
CENJ01029037
404592
Alphaproteobacteria
GGT
Thr
>WENV170117795
CENJ01029819
73490
Alphaproteobacteria
GAG
Leu
>WENV170117811
CENJ01031165
201940
Alphaproteobacteria
CAT
Met
>WENV170118115
CENJ01045548
197241
Alphaproteobacteria
GGG
Pro
>WENV170118126
CENJ01046751
193088
Alphaproteobacteria
GAT
Ile
>WENV170118137
CENJ01047077
176225
Alphaproteobacteria
TGG
Pro
>WENV170118320
CENJ01058922
281659
Alphaproteobacteria
TGC
Ala
>WENV170118351
CENJ01060804
192131
Alphaproteobacteria
GTC
Asp
>WENV170118473
CENJ01068394
179724
Alphaproteobacteria
ACG
Arg
>WENV170118579
CENJ01074944
140963
Alphaproteobacteria
>WENV170118624
CENJ01078029
176225
Alphaproteobacteria
TGG
Pro
>WENV170118677
CENJ01082163
140963
Alphaproteobacteria
>WENV170118705
CENJ01083950
424450
Alphaproteobacteria
GGT
Thr
>WENV170119129
CENJ01114527
201940
Alphaproteobacteria
CAT
Met
>WENV170119132
CENJ01114744
402067
Alphaproteobacteria
GCC
Gly
>WENV170119145
CENJ01116040
481268
Alphaproteobacteria
TCC
Gly
>WENV170119198
CENJ01119969
190609
Alphaproteobacteria
TCT
Arg
>WENV170119286
CENJ01129399
317915
Alphaproteobacteria
GAA
Phe
>WENV170119338
CENJ01133319
178237
Alphaproteobacteria
CAT
Met
>WENV170119372
CENJ01136105
281650
Alphaproteobacteria
CCA
Trp
>WENV170119427
CENJ01141279
176225
Alphaproteobacteria
TGG
Pro
>WENV170119455
CENJ01143810
140892
Alphaproteobacteria
TAG
Leu
>WENV170119489
CENJ01146817
281676
Alphaproteobacteria
TAC
Val
>WENV170119536
CENJ01149396
176490
Alphaproteobacteria
CAT
Met
>WENV170119635
CENJ01156478
305403
Alphaproteobacteria
>WENV170119801
CENJ01164708
176225
Alphaproteobacteria
TGG
Pro
>WENV170119814
CENJ01165407
400544
Alphaproteobacteria
GGT
Thr
>WENV170119904
CENJ01169411
325687
Alphaproteobacteria
CCA
Trp
>WENV170119974
CENJ01171994
207217
Alphaproteobacteria
CCG
Arg
>WENV170120228
CENJ01235884
190614
Alphaproteobacteria
TGG
Pro
>WENV170120411
CENJ01309652
178725
Alphaproteobacteria
GTG
His
>WENV170120525
CENJ01330188
487436
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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