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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170121562
CENN01000369
281659
Alphaproteobacteria
TGC
Ala
>WENV170121606
CENN01003093
314617
Alphaproteobacteria
TAC
Val
>WENV170121742
CENN01014288
179941
Alphaproteobacteria
CAT
Met
>WENV170121753
CENN01015140
229804
Alphaproteobacteria
GTC
Asp
>WENV170121756
CENN01015233
193088
Alphaproteobacteria
GAT
Ile
>WENV170121802
CENN01018986
281650
Alphaproteobacteria
CCA
Trp
>WENV170121894
CENN01028189
427428
Alphaproteobacteria
GCC
Gly
>WENV170121982
CENN01035709
435083
Alphaproteobacteria
>WENV170122181
CENN01053742
338616
Alphaproteobacteria
TGC
Ala
>WENV170122210
CENN01056466
488318
Alphaproteobacteria
TCC
Gly
>WENV170122238
CENN01059287
201940
Alphaproteobacteria
CAT
Met
>WENV170122259
CENN01062093
140876
Alphaproteobacteria
>WENV170122277
CENN01064604
360947
Alphaproteobacteria
TTT
Lys
>WENV170122423
CENN01077875
228432
Alphaproteobacteria
TGG
Pro
>WENV170122801
CENN01192191
305403
Alphaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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