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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170123182
CENO01024557
360947
Alphaproteobacteria
TTT
Lys
>WENV170123482
CENO01047295
360947
Alphaproteobacteria
TTT
Lys
>WENV170123607
CENO01058642
360947
Alphaproteobacteria
TTT
Lys
>WENV170123609
CENO01058797
360947
Alphaproteobacteria
TTT
Lys
>WENV170123146
CENO01022296
29841
Alphaproteobacteria
GGA
Ser
>WENV170124066
CENO01104985
201940
Alphaproteobacteria
CAT
Met
>WENV170123193
CENO01025260
197241
Alphaproteobacteria
GGG
Pro
>WENV170123202
CENO01025887
197241
Alphaproteobacteria
GGG
Pro
>WENV170123594
CENO01057762
481268
Alphaproteobacteria
TCC
Gly
>WENV170123547
CENO01052935
509917
Alphaproteobacteria
TCC
Gly
>WENV170123062
CENO01016808
509917
Alphaproteobacteria
TCC
Gly
>WENV170123840
CENO01082674
75222
Alphaproteobacteria
GAG
Leu
>WENV170124179
CENO01113761
29702
Alphaproteobacteria
GGA
Ser
>WENV170123391
CENO01039751
178509
Alphaproteobacteria
CCT
Arg
>WENV170123215
CENO01026877
435083
Alphaproteobacteria
>WENV170123693
CENO01066552
435083
Alphaproteobacteria
>WENV170123717
CENO01069670
145377
Alphaproteobacteria
>WENV170122998
CENO01011618
398994
Alphaproteobacteria
GTT
Asn
>WENV170123877
CENO01085355
353624
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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