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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170128149
CENP01367803
424450
Alphaproteobacteria
GGT
Thr
>WENV170125460
CENP01047696
29841
Alphaproteobacteria
GGA
Ser
>WENV170124752
CENP01006501
140876
Alphaproteobacteria
>WENV170126348
CENP01108583
201940
Alphaproteobacteria
CAT
Met
>WENV170127506
CENP01217052
201940
Alphaproteobacteria
CAT
Met
>WENV170128084
CENP01316653
290043
Alphaproteobacteria
TGC
Ala
>WENV170126332
CENP01107714
280788
Alphaproteobacteria
TTT
Lys
>WENV170126489
CENP01121150
280788
Alphaproteobacteria
TTT
Lys
>WENV170126845
CENP01156062
314617
Alphaproteobacteria
TAC
Val
>WENV170124735
CENP01005717
314617
Alphaproteobacteria
TAC
Val
>WENV170124709
CENP01003694
281659
Alphaproteobacteria
TGC
Ala
>WENV170124911
CENP01015485
305403
Alphaproteobacteria
>WENV170126640
CENP01135726
216373
Alphaproteobacteria
TGG
Pro
>WENV170127004
CENP01174675
179941
Alphaproteobacteria
CAT
Met
>WENV170127482
CENP01215760
178503
Alphaproteobacteria
GGG
Pro
>WENV170125617
CENP01057750
400544
Alphaproteobacteria
GGT
Thr
>WENV170126633
CENP01134641
400544
Alphaproteobacteria
GGT
Thr
>WENV170128027
CENP01276861
400544
Alphaproteobacteria
GGT
Thr
>WENV170126485
CENP01120664
281650
Alphaproteobacteria
CCA
Trp
>WENV170126690
CENP01143017
281650
Alphaproteobacteria
CCA
Trp
>WENV170126596
CENP01130573
118213
Alphaproteobacteria
TAG
Leu
>WENV170124972
CENP01019185
176490
Alphaproteobacteria
CAT
Met
>WENV170126373
CENP01110692
488318
Alphaproteobacteria
TCC
Gly
>WENV170126746
CENP01146971
488318
Alphaproteobacteria
TCC
Gly
>WENV170127593
CENP01224758
308123
Alphaproteobacteria
CCA
Trp
>WENV170125777
CENP01067205
195438
Alphaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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