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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170136090
CENV01000529
283257
Alphaproteobacteria
TTT
Lys
>WENV170136105
CENV01001812
178733
Alphaproteobacteria
CAT
Met
>WENV170136106
CENV01001812
216373
Alphaproteobacteria
TGG
Pro
>WENV170136139
CENV01005068
345907
Alphaproteobacteria
CGT
Thr
>WENV170136138
CENV01005068
480900
Alphaproteobacteria
GCA
Cys
>WENV170136140
CENV01005292
193463
Alphaproteobacteria
CCT
Arg
>WENV170136147
CENV01005920
73523
Alphaproteobacteria
CAG
Leu
>WENV170136174
CENV01008971
179724
Alphaproteobacteria
ACG
Arg
>WENV170136192
CENV01010630
192131
Alphaproteobacteria
GTC
Asp
>WENV170136202
CENV01011342
296698
Alphaproteobacteria
CGC
Ala
>WENV170136248
CENV01016274
121250
Alphaproteobacteria
TAG
Leu
>WENV170136278
CENV01019274
178728
Alphaproteobacteria
CGG
Pro
>WENV170136294
CENV01020165
400515
Alphaproteobacteria
GAC
Val
>WENV170136306
CENV01020993
21542
Alphaproteobacteria
GGA
Ser
>WENV170136312
CENV01022086
30671
Alphaproteobacteria
GGA
Ser
>WENV170136327
CENV01022964
282745
Alphaproteobacteria
TAC
Val
>WENV170136330
CENV01023201
201940
Alphaproteobacteria
CAT
Met
>WENV170136341
CENV01024590
73523
Alphaproteobacteria
CAG
Leu
>WENV170136342
CENV01024592
427571
Alphaproteobacteria
GCC
Gly
>WENV170136344
CENV01024762
287439
Alphaproteobacteria
CCA
Trp
>WENV170136363
CENV01026698
400517
Alphaproteobacteria
GGT
Thr
>WENV170136369
CENV01027427
195764
Alphaproteobacteria
ACG
Arg
>WENV170136370
CENV01027427
195764
Alphaproteobacteria
ACG
Arg
>WENV170136409
CENV01030784
296698
Alphaproteobacteria
CGC
Ala
>WENV170136426
CENV01032275
398999
Alphaproteobacteria
GGT
Thr
>WENV170136464
CENV01037517
289744
Alphaproteobacteria
CGT
Thr
>WENV170136517
CENV01044107
427571
Alphaproteobacteria
GCC
Gly
>WENV170136523
CENV01044985
30671
Alphaproteobacteria
GGA
Ser
>WENV170136534
CENV01045875
225944
Alphaproteobacteria
CCT
Arg
>WENV170136539
CENV01046585
400029
Alphaproteobacteria
GGT
Thr
>WENV170136548
CENV01047485
400029
Alphaproteobacteria
GGT
Thr
>WENV170136551
CENV01047713
118235
Alphaproteobacteria
TAG
Leu
>WENV170136564
CENV01049141
207217
Alphaproteobacteria
CCG
Arg
>WENV170136568
CENV01049309
400517
Alphaproteobacteria
GGT
Thr
>WENV170136659
CENV01058391
178263
Alphaproteobacteria
GTG
His
>WENV170136665
CENV01058828
480900
Alphaproteobacteria
GCA
Cys
>WENV170136669
CENV01059020
289744
Alphaproteobacteria
CGT
Thr
>WENV170136675
CENV01060181
282745
Alphaproteobacteria
TAC
Val
>WENV170136695
CENV01062340
199536
Alphaproteobacteria
TGG
Pro
>WENV170136697
CENV01062766
29739
Alphaproteobacteria
CGA
Ser
>WENV170136710
CENV01064778
428327
Alphaproteobacteria
GCC
Gly
>WENV170136728
CENV01066214
299458
Alphaproteobacteria
TTT
Lys
>WENV170136753
CENV01070848
88908
Alphaproteobacteria
GAG
Leu
>WENV170136761
CENV01072226
299509
Alphaproteobacteria
GTT
Asn
>WENV170136778
CENV01073937
195451
Alphaproteobacteria
GAC
Val
>WENV170136807
CENV01078639
403836
Alphaproteobacteria
>WENV170136812
CENV01079008
233665
Alphaproteobacteria
CCT
Arg
>WENV170136820
CENV01079681
282981
Alphaproteobacteria
CCA
Trp
>WENV170136825
CENV01080245
88908
Alphaproteobacteria
GAG
Leu
>WENV170136838
CENV01083124
400530
Alphaproteobacteria
GAC
Val
>WENV170136854
CENV01085268
399340
Alphaproteobacteria
GTT
Asn
>WENV170136876
CENV01087687
179894
Alphaproteobacteria
CCG
Arg
>WENV170136879
CENV01088103
375285
Alphaproteobacteria
TAC
Val
>WENV170136970
CENV01125745
140876
Alphaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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