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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170139898
CENX01040915
29841
Alphaproteobacteria
GGA
Ser
>WENV170142050
CENX01341160
140876
Alphaproteobacteria
>WENV170141190
CENX01163420
280788
Alphaproteobacteria
TTT
Lys
>WENV170140044
CENX01050728
487436
Alphaproteobacteria
TCC
Gly
>WENV170139375
CENX01007800
281659
Alphaproteobacteria
TGC
Ala
>WENV170141474
CENX01193027
305403
Alphaproteobacteria
>WENV170140486
CENX01089974
305403
Alphaproteobacteria
>WENV170140579
CENX01099112
29702
Alphaproteobacteria
GGA
Ser
>WENV170141174
CENX01161279
317915
Alphaproteobacteria
GAA
Phe
>WENV170141671
CENX01206956
400544
Alphaproteobacteria
GGT
Thr
>WENV170140751
CENX01116039
121990
Alphaproteobacteria
TAG
Leu
>WENV170141008
CENX01141988
283257
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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