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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170140479
CENX01089364
400818
Bacteroidota
TTC
Glu
>WENV170140560
CENX01097217
400818
Bacteroidota
TTC
Glu
>WENV170141661
CENX01205977
400818
Bacteroidota
TTC
Glu
>WENV170140834
CENX01124485
288475
Bacteroidota
GCC
Gly
>WENV170139415
CENX01010111
198599
Bacteroidota
GTG
His
>WENV170141097
CENX01152062
198599
Bacteroidota
GTG
His
>WENV170139391
CENX01008982
281538
Bacteroidota
GAA
Phe
>WENV170139789
CENX01032495
156605
Bacteroidota
GAC
Val
>WENV170141251
CENX01170688
156605
Bacteroidota
GAC
Val
>WENV170141590
CENX01201493
240785
Bacteroidota
GTC
Asp
>WENV170139308
CENX01001777
240785
Bacteroidota
GTC
Asp
>WENV170140840
CENX01125016
240785
Bacteroidota
GTC
Asp
>WENV170141039
CENX01144769
240785
Bacteroidota
GTC
Asp
>WENV170141843
CENX01213514
240785
Bacteroidota
GTC
Asp
>WENV170142182
CENX01403677
155786
Bacteroidota
TGG
Pro
>WENV170141805
CENX01212691
320669
Bacteroidota
GAA
Phe
>WENV170140887
CENX01130710
320669
Bacteroidota
GAA
Phe
>WENV170140464
CENX01088185
320669
Bacteroidota
GAA
Phe
>WENV170140270
CENX01070755
320669
Bacteroidota
GAA
Phe
>WENV170140262
CENX01069862
320669
Bacteroidota
GAA
Phe
>WENV170139713
CENX01028482
320669
Bacteroidota
GAA
Phe
>WENV170139971
CENX01046328
336507
Bacteroidota
TCC
Gly
>WENV170140367
CENX01079621
336507
Bacteroidota
TCC
Gly
>WENV170139401
CENX01009416
155808
Bacteroidota
TGG
Pro
>WENV170140978
CENX01139587
155808
Bacteroidota
TGG
Pro
>WENV170140397
CENX01082301
121312
Bacteroidota
TAG
Leu
>WENV170139973
CENX01046451
121312
Bacteroidota
TAG
Leu
>WENV170141384
CENX01183723
227539
Bacteroidota
GTT
Asn
>WENV170140773
CENX01118028
227539
Bacteroidota
GTT
Asn
>WENV170140086
CENX01054507
227539
Bacteroidota
GTT
Asn
>WENV170139480
CENX01014120
227539
Bacteroidota
GTT
Asn
>WENV170141071
CENX01148723
235895
Bacteroidota
GTT
Asn
>WENV170140494
CENX01090609
235895
Bacteroidota
GTT
Asn
>WENV170140437
CENX01085999
235895
Bacteroidota
GTT
Asn
>WENV170140342
CENX01076965
193718
Bacteroidota
GTC
Asp
>WENV170140606
CENX01101192
193718
Bacteroidota
GTC
Asp
>WENV170141561
CENX01198913
193718
Bacteroidota
GTC
Asp
>WENV170141589
CENX01201429
231584
Bacteroidota
TCT
Arg
>WENV170140742
CENX01115063
231584
Bacteroidota
TCT
Arg
>WENV170140532
CENX01093932
347386
Bacteroidota
CCA
Trp
>WENV170140280
CENX01071924
347386
Bacteroidota
CCA
Trp
>WENV170139737
CENX01029543
347386
Bacteroidota
CCA
Trp
>WENV170139361
CENX01006499
347386
Bacteroidota
CCA
Trp
>WENV170141586
CENX01200820
284409
Bacteroidota
CAT
Met
>WENV170140567
CENX01097827
284409
Bacteroidota
CAT
Met
>WENV170139390
CENX01008856
284409
Bacteroidota
CAT
Met
>WENV170140823
CENX01123644
183480
Bacteroidota
TGC
Ala
>WENV170140558
CENX01096786
183480
Bacteroidota
TGC
Ala
>WENV170140394
CENX01081969
24958
Bacteroidota
GGA
Ser
>WENV170140088
CENX01054613
179598
Bacteroidota
CAT
Met
>WENV170140566
CENX01097677
399343
Bacteroidota
TTC
Glu
>WENV170141286
CENX01174723
56162
Bacteroidota
TGA
Ser
>WENV170139660
CENX01025038
56162
Bacteroidota
TGA
Ser
>WENV170140765
CENX01116795
480568
Bacteroidota
GCA
Cys
>WENV170139886
CENX01039911
179695
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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