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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170144268
CENY01139564
296698
Alphaproteobacteria
CGC
Ala
>WENV170145527
CENY01349366
282745
Alphaproteobacteria
TAC
Val
>WENV170143193
CENY01055643
424450
Alphaproteobacteria
GGT
Thr
>WENV170144138
CENY01128280
210530
Alphaproteobacteria
CGG
Pro
>WENV170143935
CENY01110650
140963
Alphaproteobacteria
>WENV170143510
CENY01076766
201940
Alphaproteobacteria
CAT
Met
>WENV170143467
CENY01073671
201940
Alphaproteobacteria
CAT
Met
>WENV170143557
CENY01080391
400518
Alphaproteobacteria
GAA
Phe
>WENV170143325
CENY01063701
178263
Alphaproteobacteria
GTG
His
>WENV170145240
CENY01291977
290043
Alphaproteobacteria
TGC
Ala
>WENV170145373
CENY01326598
288727
Alphaproteobacteria
>WENV170142833
CENY01030734
303339
Alphaproteobacteria
GGC
Ala
>WENV170144687
CENY01167123
303339
Alphaproteobacteria
GGC
Ala
>WENV170145456
CENY01342560
282977
Alphaproteobacteria
CAT
Met
>WENV170143152
CENY01052278
427571
Alphaproteobacteria
GCC
Gly
>WENV170142675
CENY01021977
178509
Alphaproteobacteria
CCT
Arg
>WENV170143758
CENY01094566
102146
Alphaproteobacteria
GTA
Tyr
>WENV170143396
CENY01069102
210541
Alphaproteobacteria
CAT
Met
>WENV170143932
CENY01110424
73167
Alphaproteobacteria
GAG
Leu
>WENV170145554
CENY01351643
21542
Alphaproteobacteria
GGA
Ser
>WENV170144303
CENY01143211
400544
Alphaproteobacteria
GGT
Thr
>WENV170143978
CENY01113239
400517
Alphaproteobacteria
GGT
Thr
>WENV170144463
CENY01153250
481098
Alphaproteobacteria
CTG
Gln
>WENV170143355
CENY01066606
118066
Alphaproteobacteria
TAG
Leu
>WENV170144438
CENY01152004
178237
Alphaproteobacteria
CAT
Met
>WENV170145446
CENY01341401
481099
Alphaproteobacteria
TCC
Gly
>WENV170144932
CENY01171880
428327
Alphaproteobacteria
GCC
Gly
>WENV170143746
CENY01093317
29739
Alphaproteobacteria
CGA
Ser
>WENV170145369
CENY01325916
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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