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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170148110
CENZ01204194
329164
Gammaproteobacteria
TTT
Lys
>WENV170145661
CENZ01003150
13452
Gammaproteobacteria
GCT
Ser
>WENV170148150
CENZ01212487
20410
Gammaproteobacteria
TGA
Ser
>WENV170147147
CENZ01116245
292006
Gammaproteobacteria
TGC
Ala
>WENV170146315
CENZ01046627
20487
Gammaproteobacteria
TGA
Ser
>WENV170148161
CENZ01225028
178466
Gammaproteobacteria
CCA
Trp
>WENV170145662
CENZ01003150
232119
Gammaproteobacteria
ACG
Arg
>WENV170145663
CENZ01003150
232119
Gammaproteobacteria
ACG
Arg
>WENV170145937
CENZ01021895
74048
Gammaproteobacteria
CAA
Leu
>WENV170148275
CENZ01295154
334421
Gammaproteobacteria
TGT
Thr
>WENV170147705
CENZ01179979
177028
Gammaproteobacteria
CAT
Met
>WENV170147286
CENZ01129560
177028
Gammaproteobacteria
CAT
Met
>WENV170146827
CENZ01084655
177028
Gammaproteobacteria
CAT
Met
>WENV170147519
CENZ01157412
488965
Gammaproteobacteria
GCA
Cys
>WENV170147245
CENZ01125651
176301
Gammaproteobacteria
GAT
Ile
>WENV170147146
CENZ01116245
176301
Gammaproteobacteria
GAT
Ile
>WENV170145670
CENZ01003312
176301
Gammaproteobacteria
GAT
Ile
>WENV170146922
CENZ01094490
400372
Gammaproteobacteria
CCT
Arg
>WENV170147349
CENZ01137292
179710
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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