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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170155193
CEOG01001363
331059
Gammaproteobacteria
>WENV170155194
CEOG01001363
331059
Gammaproteobacteria
>WENV170155221
CEOG01003308
297790
Gammaproteobacteria
TGC
Ala
>WENV170155220
CEOG01003308
176301
Gammaproteobacteria
GAT
Ile
>WENV170155246
CEOG01004847
178540
Gammaproteobacteria
TGG
Pro
>WENV170155256
CEOG01007070
281939
Gammaproteobacteria
TTT
Lys
>WENV170155257
CEOG01007088
282018
Gammaproteobacteria
TGT
Thr
>WENV170155271
CEOG01008145
230011
Gammaproteobacteria
ACG
Arg
>WENV170155270
CEOG01008145
230011
Gammaproteobacteria
ACG
Arg
>WENV170155279
CEOG01009385
282550
Gammaproteobacteria
TAC
Val
>WENV170155311
CEOG01014493
197551
Gammaproteobacteria
TCT
Arg
>WENV170155329
CEOG01017084
243308
Gammaproteobacteria
TGG
Pro
>WENV170155410
CEOG01027272
363863
Gammaproteobacteria
CCA
Trp
>WENV170155464
CEOG01034734
209464
Gammaproteobacteria
CCG
Arg
>WENV170155767
CEOG01108073
402723
Gammaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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