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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170166042
CEOO01029040
117806
Betaproteobacteria
GTA
Tyr
>WENV170166206
CEOO01042330
193851
Betaproteobacteria
TTG
Gln
>WENV170166490
CEOO01069508
118799
Betaproteobacteria
GAG
Leu
>WENV170166577
CEOO01079147
292271
Betaproteobacteria
TGT
Thr
>WENV170166591
CEOO01080465
285019
Betaproteobacteria
CCT
Arg
>WENV170166722
CEOO01094816
180114
Betaproteobacteria
CAT
Met
>WENV170166767
CEOO01098175
118799
Betaproteobacteria
GAG
Leu
>WENV170166945
CEOO01109499
186768
Betaproteobacteria
>WENV170166946
CEOO01109499
186768
Betaproteobacteria
>WENV170166963
CEOO01109780
179360
Betaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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