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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170167104
CEOO01159690
480941
Gammaproteobacteria
TCC
Gly
>WENV170166296
CEOO01049559
282550
Gammaproteobacteria
TAC
Val
>WENV170165813
CEOO01010147
292006
Gammaproteobacteria
TGC
Ala
>WENV170167151
CEOO01175000
181365
Gammaproteobacteria
CAT
Met
>WENV170165772
CEOO01006653
176301
Gammaproteobacteria
GAT
Ile
>WENV170165812
CEOO01010147
176301
Gammaproteobacteria
GAT
Ile
>WENV170166647
CEOO01087869
176301
Gammaproteobacteria
GAT
Ile
>WENV170166746
CEOO01096721
201377
Gammaproteobacteria
TGG
Pro
>WENV170166412
CEOO01061803
282018
Gammaproteobacteria
TGT
Thr
>WENV170165885
CEOO01015248
283486
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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