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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170170440
CEOQ01003423
192275
Alphaproteobacteria
GTG
His
>WENV170170451
CEOQ01003758
29739
Alphaproteobacteria
CGA
Ser
>WENV170170452
CEOQ01003758
183632
Alphaproteobacteria
GGG
Pro
>WENV170170454
CEOQ01003759
178263
Alphaproteobacteria
GTG
His
>WENV170170455
CEOQ01003759
201940
Alphaproteobacteria
CAT
Met
>WENV170170522
CEOQ01008405
400518
Alphaproteobacteria
GAA
Phe
>WENV170170658
CEOQ01015045
176153
Alphaproteobacteria
CAT
Met
>WENV170170735
CEOQ01021009
308123
Alphaproteobacteria
CCA
Trp
>WENV170170748
CEOQ01021828
192275
Alphaproteobacteria
GTG
His
>WENV170170900
CEOQ01029362
282745
Alphaproteobacteria
TAC
Val
>WENV170171075
CEOQ01038781
427571
Alphaproteobacteria
GCC
Gly
>WENV170171186
CEOQ01043348
398994
Alphaproteobacteria
GTT
Asn
>WENV170171345
CEOQ01050719
481098
Alphaproteobacteria
CTG
Gln
>WENV170171346
CEOQ01050719
480900
Alphaproteobacteria
GCA
Cys
>WENV170171764
CEOQ01073823
20437
Alphaproteobacteria
GGA
Ser
>WENV170171828
CEOQ01076895
481099
Alphaproteobacteria
TCC
Gly
>WENV170171829
CEOQ01076896
400517
Alphaproteobacteria
GGT
Thr
>WENV170172216
CEOQ01103178
487436
Alphaproteobacteria
TCC
Gly
>WENV170172541
CEOQ01127543
288727
Alphaproteobacteria
>WENV170172664
CEOQ01136842
193088
Alphaproteobacteria
GAT
Ile
>WENV170172970
CEOQ01166364
176153
Alphaproteobacteria
CAT
Met
>WENV170173024
CEOQ01171528
481099
Alphaproteobacteria
TCC
Gly
>WENV170173092
CEOQ01178205
201940
Alphaproteobacteria
CAT
Met
>WENV170173199
CEOQ01188514
480900
Alphaproteobacteria
GCA
Cys
>WENV170173346
CEOQ01201217
281650
Alphaproteobacteria
CCA
Trp
>WENV170173439
CEOQ01211381
509917
Alphaproteobacteria
TCC
Gly
>WENV170174048
CEOQ01264408
305403
Alphaproteobacteria
>WENV170174186
CEOQ01274392
13606
Alphaproteobacteria
GCT
Ser
>WENV170174198
CEOQ01275275
282977
Alphaproteobacteria
CAT
Met
>WENV170174417
CEOQ01289730
176153
Alphaproteobacteria
CAT
Met
>WENV170174910
CEOQ01370494
178733
Alphaproteobacteria
CAT
Met
>WENV170174911
CEOQ01370494
178734
Alphaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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