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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170175758
CEOS01004505
123265
Gammaproteobacteria
GAG
Leu
>WENV170176715
CEOS01115569
487002
Gammaproteobacteria
GCA
Cys
>WENV170176857
CEOS01132205
297858
Gammaproteobacteria
TGC
Ala
>WENV170176716
CEOS01115569
73781
Gammaproteobacteria
TAA
Leu
>WENV170175910
CEOS01018082
314350
Gammaproteobacteria
CCA
Trp
>WENV170176444
CEOS01077294
180053
Gammaproteobacteria
CAT
Met
>WENV170177087
CEOS01178366
301369
Gammaproteobacteria
TAC
Val
>WENV170175919
CEOS01019016
190706
Gammaproteobacteria
ACG
Arg
>WENV170176382
CEOS01070389
73830
Gammaproteobacteria
CAA
Leu
>WENV170175743
CEOS01003536
282550
Gammaproteobacteria
TAC
Val
>WENV170176546
CEOS01091330
74339
Gammaproteobacteria
GAG
Leu
>WENV170176099
CEOS01038763
74339
Gammaproteobacteria
GAG
Leu
>WENV170176571
CEOS01094222
178540
Gammaproteobacteria
TGG
Pro
>WENV170175762
CEOS01005007
292006
Gammaproteobacteria
TGC
Ala
>WENV170176760
CEOS01120748
480516
Gammaproteobacteria
GCA
Cys
>WENV170176671
CEOS01108579
178541
Gammaproteobacteria
CGG
Pro
>WENV170176790
CEOS01123691
197498
Gammaproteobacteria
TGG
Pro
>WENV170176220
CEOS01052330
208229
Gammaproteobacteria
TGG
Pro
>WENV170176606
CEOS01099225
306288
Gammaproteobacteria
GCC
Gly
>WENV170176530
CEOS01089132
176301
Gammaproteobacteria
GAT
Ile
>WENV170175761
CEOS01005007
176301
Gammaproteobacteria
GAT
Ile
>WENV170177212
CEOS01224255
400184
Gammaproteobacteria
>WENV170175918
CEOS01019016
8667
Gammaproteobacteria
GCT
Ser
>WENV170176826
CEOS01127858
176518
Gammaproteobacteria
CAT
Met
>WENV170176498
CEOS01084971
140861
Gammaproteobacteria
GTA
Tyr
>WENV170177184
CEOS01217504
178533
Gammaproteobacteria
GGG
Pro
>WENV170176528
CEOS01088816
283486
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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