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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170180602
CEOW01113383
480623
Cyanobacteriota
TCC
Gly
>WENV170180476
CEOW01099201
400475
Cyanobacteriota
TGT
Thr
>WENV170181040
CEOW01172202
400473
Cyanobacteriota
GAC
Val
>WENV170179952
CEOW01035490
285848
Cyanobacteriota
CAT
Met
>WENV170180245
CEOW01068562
14711
Cyanobacteriota
GCT
Ser
>WENV170180577
CEOW01110872
29722
Cyanobacteriota
CGA
Ser
>WENV170180101
CEOW01051938
292138
Cyanobacteriota
CCA
Trp
>WENV170180205
CEOW01062483
401929
Cyanobacteriota
TTG
Gln
>WENV170180199
CEOW01062224
283431
Cyanobacteriota
GTG
His
>WENV170179917
CEOW01031266
410287
Cyanobacteriota
CCC
Gly
>WENV170180399
CEOW01089612
177076
Cyanobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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