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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170180106
CEOW01051982
284706
Gammaproteobacteria
GTT
Asn
>WENV170180705
CEOW01123589
73123
Gammaproteobacteria
CAA
Leu
>WENV170180134
CEOW01054406
314350
Gammaproteobacteria
CCA
Trp
>WENV170180171
CEOW01059404
180053
Gammaproteobacteria
CAT
Met
>WENV170181235
CEOW01251297
20618
Gammaproteobacteria
GGA
Ser
>WENV170180224
CEOW01065655
292006
Gammaproteobacteria
TGC
Ala
>WENV170180427
CEOW01092844
480516
Gammaproteobacteria
GCA
Cys
>WENV170180757
CEOW01129024
56694
Gammaproteobacteria
GGA
Ser
>WENV170181208
CEOW01241429
401684
Gammaproteobacteria
CCT
Arg
>WENV170181160
CEOW01224198
74048
Gammaproteobacteria
CAA
Leu
>WENV170180473
CEOW01099046
481678
Gammaproteobacteria
GCA
Cys
>WENV170180420
CEOW01091998
306288
Gammaproteobacteria
GCC
Gly
>WENV170180045
CEOW01044685
306288
Gammaproteobacteria
GCC
Gly
>WENV170180426
CEOW01092844
306288
Gammaproteobacteria
GCC
Gly
>WENV170180482
CEOW01099770
306288
Gammaproteobacteria
GCC
Gly
>WENV170180472
CEOW01099046
319139
Gammaproteobacteria
GCC
Gly
>WENV170181189
CEOW01232534
488965
Gammaproteobacteria
GCA
Cys
>WENV170181231
CEOW01250766
180680
Gammaproteobacteria
GAC
Val
>WENV170180321
CEOW01079630
176301
Gammaproteobacteria
GAT
Ile
>WENV170180223
CEOW01065655
176301
Gammaproteobacteria
GAT
Ile
>WENV170181081
CEOW01187883
180678
Gammaproteobacteria
CCG
Arg
>WENV170179998
CEOW01040919
285547
Gammaproteobacteria
TTG
Gln
>WENV170180468
CEOW01098990
201377
Gammaproteobacteria
TGG
Pro
>WENV170180470
CEOW01098990
281283
Gammaproteobacteria
GTG
His
>WENV170180635
CEOW01117271
281939
Gammaproteobacteria
TTT
Lys
>WENV170181115
CEOW01204922
282902
Gammaproteobacteria
TGT
Thr
>WENV170180663
CEOW01119348
282902
Gammaproteobacteria
TGT
Thr
>WENV170180940
CEOW01143761
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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