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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170183073
CEOY01054540
291892
Alphaproteobacteria
TAC
Val
>WENV170183273
CEOY01079724
140876
Alphaproteobacteria
>WENV170182721
CEOY01004679
290043
Alphaproteobacteria
TGC
Ala
>WENV170182983
CEOY01041814
280788
Alphaproteobacteria
TTT
Lys
>WENV170183006
CEOY01044480
400514
Alphaproteobacteria
TTG
Gln
>WENV170183089
CEOY01056628
408543
Alphaproteobacteria
GAC
Val
>WENV170182915
CEOY01031788
400029
Alphaproteobacteria
GGT
Thr
>WENV170182847
CEOY01020184
398994
Alphaproteobacteria
GTT
Asn
>WENV170182733
CEOY01006504
29598
Alphaproteobacteria
GGA
Ser
>WENV170182734
CEOY01006800
283257
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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