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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170187486
CEPA01163933
158246
Gammaproteobacteria
GTC
Asp
>WENV170187683
CEPA01200450
20273
Gammaproteobacteria
TGA
Ser
>WENV170187857
CEPA01298665
176796
Gammaproteobacteria
GGG
Pro
>WENV170187808
CEPA01274716
287057
Gammaproteobacteria
GAA
Phe
>WENV170187394
CEPA01156149
399250
Gammaproteobacteria
TCC
Gly
>WENV170186662
CEPA01070899
140925
Gammaproteobacteria
GTA
Tyr
>WENV170187023
CEPA01109956
281282
Gammaproteobacteria
TTC
Glu
>WENV170186028
CEPA01012191
221668
Gammaproteobacteria
ACG
Arg
>WENV170186027
CEPA01012191
221668
Gammaproteobacteria
ACG
Arg
>WENV170186026
CEPA01012191
13452
Gammaproteobacteria
GCT
Ser
>WENV170187393
CEPA01156149
126555
Gammaproteobacteria
GTA
Tyr
>WENV170186663
CEPA01070899
481325
Gammaproteobacteria
TCC
Gly
>WENV170187514
CEPA01166238
401684
Gammaproteobacteria
CCT
Arg
>WENV170187406
CEPA01158288
208229
Gammaproteobacteria
TGG
Pro
>WENV170187796
CEPA01269580
74048
Gammaproteobacteria
CAA
Leu
>WENV170186193
CEPA01024556
481678
Gammaproteobacteria
GCA
Cys
>WENV170186169
CEPA01023200
306288
Gammaproteobacteria
GCC
Gly
>WENV170187798
CEPA01269960
334421
Gammaproteobacteria
TGT
Thr
>WENV170186282
CEPA01031579
488965
Gammaproteobacteria
GCA
Cys
>WENV170186954
CEPA01102162
176301
Gammaproteobacteria
GAT
Ile
>WENV170186874
CEPA01093801
176301
Gammaproteobacteria
GAT
Ile
>WENV170187856
CEPA01297659
180678
Gammaproteobacteria
CCG
Arg
>WENV170187533
CEPA01168001
285547
Gammaproteobacteria
TTG
Gln
>WENV170187270
CEPA01142778
23169
Gammaproteobacteria
GGA
Ser
>WENV170187395
CEPA01156149
296808
Gammaproteobacteria
GGT
Thr
>WENV170186733
CEPA01078049
300318
Gammaproteobacteria
GGC
Ala
>WENV170186404
CEPA01045229
300318
Gammaproteobacteria
GGC
Ala
>WENV170186235
CEPA01026852
300318
Gammaproteobacteria
GGC
Ala
>WENV170186014
CEPA01011735
300318
Gammaproteobacteria
GGC
Ala
>WENV170186332
CEPA01037926
281939
Gammaproteobacteria
TTT
Lys
>WENV170186661
CEPA01070899
282902
Gammaproteobacteria
TGT
Thr
>WENV170187632
CEPA01173102
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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