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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170189555
CEPC01006606
74339
Gammaproteobacteria
GAG
Leu
>WENV170189567
CEPC01007910
180679
Gammaproteobacteria
CCA
Trp
>WENV170189608
CEPC01011555
282018
Gammaproteobacteria
TGT
Thr
>WENV170189649
CEPC01015285
13452
Gammaproteobacteria
GCT
Ser
>WENV170189650
CEPC01015285
232119
Gammaproteobacteria
ACG
Arg
>WENV170189651
CEPC01015285
232119
Gammaproteobacteria
ACG
Arg
>WENV170189661
CEPC01016105
176301
Gammaproteobacteria
GAT
Ile
>WENV170189746
CEPC01025078
282550
Gammaproteobacteria
TAC
Val
>WENV170189750
CEPC01026012
180680
Gammaproteobacteria
GAC
Val
>WENV170189874
CEPC01040333
158246
Gammaproteobacteria
GTC
Asp
>WENV170189892
CEPC01042376
140925
Gammaproteobacteria
GTA
Tyr
>WENV170189922
CEPC01044551
176301
Gammaproteobacteria
GAT
Ile
>WENV170190007
CEPC01053740
401684
Gammaproteobacteria
CCT
Arg
>WENV170190054
CEPC01058412
328691
Gammaproteobacteria
GGT
Thr
>WENV170190321
CEPC01092780
286691
Gammaproteobacteria
GTG
His
>WENV170190337
CEPC01094691
481678
Gammaproteobacteria
GCA
Cys
>WENV170190610
CEPC01130497
306288
Gammaproteobacteria
GCC
Gly
>WENV170190693
CEPC01138202
74048
Gammaproteobacteria
CAA
Leu
>WENV170190770
CEPC01146235
180053
Gammaproteobacteria
CAT
Met
>WENV170190854
CEPC01155341
284706
Gammaproteobacteria
GTT
Asn
>WENV170190903
CEPC01168234
180678
Gammaproteobacteria
CCG
Arg
>WENV170190955
CEPC01190848
20618
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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