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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170191676
CEPD01047344
363863
Gammaproteobacteria
CCA
Trp
>WENV170191653
CEPD01045440
183804
Gammaproteobacteria
CAT
Met
>WENV170191236
CEPD01001523
178164
Gammaproteobacteria
GAT
Ile
>WENV170191547
CEPD01032786
318157
Gammaproteobacteria
GTT
Asn
>WENV170191394
CEPD01014441
328691
Gammaproteobacteria
GGT
Thr
>WENV170191533
CEPD01031300
197233
Gammaproteobacteria
CAT
Met
>WENV170191222
CEPD01000356
284693
Gammaproteobacteria
TTC
Glu
>WENV170191693
CEPD01049556
73501
Gammaproteobacteria
GAG
Leu
>WENV170191532
CEPD01031300
444310
Gammaproteobacteria
TTG
Gln
>WENV170191772
CEPD01059803
178535
Gammaproteobacteria
CCT
Arg
>WENV170191797
CEPD01063808
20410
Gammaproteobacteria
TGA
Ser
>WENV170191818
CEPD01066066
178540
Gammaproteobacteria
TGG
Pro
>WENV170191792
CEPD01063215
73498
Gammaproteobacteria
CAA
Leu
>WENV170191359
CEPD01011306
178541
Gammaproteobacteria
CGG
Pro
>WENV170191893
CEPD01074829
443066
Gammaproteobacteria
GGT
Thr
>WENV170191303
CEPD01007056
197498
Gammaproteobacteria
TGG
Pro
>WENV170191603
CEPD01038529
176545
Gammaproteobacteria
CAT
Met
>WENV170191253
CEPD01002933
56340
Gammaproteobacteria
GGA
Ser
>WENV170191714
CEPD01053544
307269
Gammaproteobacteria
TTC
Glu
>WENV170191266
CEPD01004262
178532
Gammaproteobacteria
CCG
Arg
>WENV170191458
CEPD01022028
178550
Gammaproteobacteria
ACG
Arg
>WENV170191459
CEPD01022028
178550
Gammaproteobacteria
ACG
Arg
>WENV170191669
CEPD01046885
180680
Gammaproteobacteria
GAC
Val
>WENV170191365
CEPD01011623
89769
Gammaproteobacteria
CAG
Leu
>WENV170191364
CEPD01011623
89769
Gammaproteobacteria
CAG
Leu
>WENV170191606
CEPD01039605
180678
Gammaproteobacteria
CCG
Arg
>WENV170192029
CEPD01118717
180681
Gammaproteobacteria
TGG
Pro
>WENV170191457
CEPD01022028
8667
Gammaproteobacteria
GCT
Ser
>WENV170191891
CEPD01074829
140861
Gammaproteobacteria
GTA
Tyr
>WENV170191544
CEPD01032443
178533
Gammaproteobacteria
GGG
Pro
>WENV170191478
CEPD01024674
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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