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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170192927
CEPG01033167
296698
Alphaproteobacteria
CGC
Ala
>WENV170192763
CEPG01007956
282745
Alphaproteobacteria
TAC
Val
>WENV170192792
CEPG01010797
193463
Alphaproteobacteria
CCT
Arg
>WENV170192893
CEPG01027846
304182
Alphaproteobacteria
CTT
Lys
>WENV170192853
CEPG01020796
188967
Alphaproteobacteria
TTT
Lys
>WENV170192733
CEPG01002091
400518
Alphaproteobacteria
GAA
Phe
>WENV170192873
CEPG01024018
178263
Alphaproteobacteria
GTG
His
>WENV170192723
CEPG01000603
288727
Alphaproteobacteria
>WENV170192918
CEPG01031699
454954
Alphaproteobacteria
CAC
Val
>WENV170192967
CEPG01039987
178733
Alphaproteobacteria
CAT
Met
>WENV170192785
CEPG01009928
427571
Alphaproteobacteria
GCC
Gly
>WENV170192962
CEPG01039644
427571
Alphaproteobacteria
GCC
Gly
>WENV170192931
CEPG01033584
400186
Alphaproteobacteria
GTT
Asn
>WENV170192768
CEPG01008400
29610
Alphaproteobacteria
TGA
Ser
>WENV170192887
CEPG01026934
400517
Alphaproteobacteria
GGT
Thr
>WENV170192875
CEPG01024260
481098
Alphaproteobacteria
CTG
Gln
>WENV170193017
CEPG01057057
403581
Alphaproteobacteria
TTG
Gln
>WENV170192954
CEPG01038831
282981
Alphaproteobacteria
CCA
Trp
>WENV170192811
CEPG01014097
480946
Alphaproteobacteria
TTG
Gln
>WENV170192975
CEPG01040868
13311
Alphaproteobacteria
GCT
Ser
>WENV170192860
CEPG01022452
184816
Alphaproteobacteria
GTG
His
>WENV170193030
CEPG01061788
13606
Alphaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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