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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170195960
CEPK01011639
282894
Gammaproteobacteria
GAA
Phe
>WENV170196006
CEPK01015471
183804
Gammaproteobacteria
CAT
Met
>WENV170197275
CEPK01117401
328691
Gammaproteobacteria
GGT
Thr
>WENV170198110
CEPK01238850
20618
Gammaproteobacteria
GGA
Ser
>WENV170196032
CEPK01017955
221668
Gammaproteobacteria
ACG
Arg
>WENV170196033
CEPK01017955
221668
Gammaproteobacteria
ACG
Arg
>WENV170196031
CEPK01017955
13452
Gammaproteobacteria
GCT
Ser
>WENV170196530
CEPK01051699
292006
Gammaproteobacteria
TGC
Ala
>WENV170195942
CEPK01010252
56694
Gammaproteobacteria
GGA
Ser
>WENV170198038
CEPK01189906
292174
Gammaproteobacteria
GAA
Phe
>WENV170196175
CEPK01028934
401684
Gammaproteobacteria
CCT
Arg
>WENV170197850
CEPK01173865
208229
Gammaproteobacteria
TGG
Pro
>WENV170196220
CEPK01031036
74048
Gammaproteobacteria
CAA
Leu
>WENV170196341
CEPK01037983
481678
Gammaproteobacteria
GCA
Cys
>WENV170197126
CEPK01103109
334421
Gammaproteobacteria
TGT
Thr
>WENV170197995
CEPK01182661
180680
Gammaproteobacteria
GAC
Val
>WENV170196529
CEPK01051699
176301
Gammaproteobacteria
GAT
Ile
>WENV170196492
CEPK01049527
176301
Gammaproteobacteria
GAT
Ile
>WENV170196487
CEPK01049153
285547
Gammaproteobacteria
TTG
Gln
>WENV170197925
CEPK01179352
180679
Gammaproteobacteria
CCA
Trp
>WENV170197730
CEPK01165904
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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