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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170200068
CEPM01017868
328691
Gammaproteobacteria
GGT
Thr
>WENV170200274
CEPM01065853
20618
Gammaproteobacteria
GGA
Ser
>WENV170200254
CEPM01060062
92638
Gammaproteobacteria
TAA
Leu
>WENV170200269
CEPM01064405
74048
Gammaproteobacteria
CAA
Leu
>WENV170200253
CEPM01060062
481678
Gammaproteobacteria
GCA
Cys
>WENV170200041
CEPM01013898
180680
Gammaproteobacteria
GAC
Val
>WENV170200189
CEPM01034360
285547
Gammaproteobacteria
TTG
Gln
>WENV170200034
CEPM01013110
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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