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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170211609
CEPW01089207
360947
Alphaproteobacteria
TTT
Lys
>WENV170210941
CEPW01025556
178510
Alphaproteobacteria
ACG
Arg
>WENV170211408
CEPW01067062
140963
Alphaproteobacteria
>WENV170212192
CEPW01157391
201940
Alphaproteobacteria
CAT
Met
>WENV170212038
CEPW01138114
232927
Alphaproteobacteria
CAT
Met
>WENV170210811
CEPW01017311
29702
Alphaproteobacteria
GGA
Ser
>WENV170210642
CEPW01002568
178509
Alphaproteobacteria
CCT
Arg
>WENV170210737
CEPW01009891
435083
Alphaproteobacteria
>WENV170210959
CEPW01027374
228432
Alphaproteobacteria
TGG
Pro
>WENV170211921
CEPW01122785
398994
Alphaproteobacteria
GTT
Asn
>WENV170212251
CEPW01164045
353624
Alphaproteobacteria
CCA
Trp
>WENV170211021
CEPW01032012
353624
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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