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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170212413
CEPW01177154
158246
Gammaproteobacteria
GTC
Asp
>WENV170211941
CEPW01125190
328691
Gammaproteobacteria
GGT
Thr
>WENV170212871
CEPW01309622
13452
Gammaproteobacteria
GCT
Ser
>WENV170212515
CEPW01180625
56694
Gammaproteobacteria
GGA
Ser
>WENV170210832
CEPW01018384
232119
Gammaproteobacteria
ACG
Arg
>WENV170211812
CEPW01109923
74048
Gammaproteobacteria
CAA
Leu
>WENV170212598
CEPW01219599
29724
Gammaproteobacteria
GCT
Ser
>WENV170212211
CEPW01160193
242775
Gammaproteobacteria
TGG
Pro
>WENV170210911
CEPW01023532
177028
Gammaproteobacteria
CAT
Met
>WENV170210689
CEPW01005682
370389
Gammaproteobacteria
GGC
Ala
>WENV170211386
CEPW01064048
370389
Gammaproteobacteria
GGC
Ala
>WENV170210731
CEPW01009604
176301
Gammaproteobacteria
GAT
Ile
>WENV170211204
CEPW01047841
186591
Gammaproteobacteria
ACG
Arg
>WENV170211203
CEPW01047841
186591
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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