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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170218371
CEPZ01003889
189904
Gammaproteobacteria
CCA
Trp
>WENV170219006
CEPZ01034498
422716
Gammaproteobacteria
TTG
Gln
>WENV170218905
CEPZ01028368
29803
Gammaproteobacteria
GGA
Ser
>WENV170220031
CEPZ01087964
178469
Gammaproteobacteria
CAT
Met
>WENV170218446
CEPZ01007450
20618
Gammaproteobacteria
GGA
Ser
>WENV170219211
CEPZ01049126
284022
Gammaproteobacteria
TGT
Thr
>WENV170218680
CEPZ01017489
287057
Gammaproteobacteria
GAA
Phe
>WENV170220281
CEPZ01133344
311084
Gammaproteobacteria
GCC
Gly
>WENV170218451
CEPZ01007577
325309
Gammaproteobacteria
GCC
Gly
>WENV170218395
CEPZ01004963
180717
Gammaproteobacteria
CCA
Trp
>WENV170220282
CEPZ01133344
480629
Gammaproteobacteria
GCA
Cys
>WENV170218315
CEPZ01001597
20487
Gammaproteobacteria
TGA
Ser
>WENV170219463
CEPZ01065647
20487
Gammaproteobacteria
TGA
Ser
>WENV170220153
CEPZ01095593
181513
Gammaproteobacteria
TGG
Pro
>WENV170220572
CEPZ01182928
176242
Gammaproteobacteria
CCG
Arg
>WENV170220136
CEPZ01090563
56694
Gammaproteobacteria
GGA
Ser
>WENV170219802
CEPZ01082595
178466
Gammaproteobacteria
CCA
Trp
>WENV170219904
CEPZ01085707
178466
Gammaproteobacteria
CCA
Trp
>WENV170218804
CEPZ01023030
303413
Gammaproteobacteria
GGT
Thr
>WENV170220467
CEPZ01170100
282683
Gammaproteobacteria
GGC
Ala
>WENV170219186
CEPZ01047079
317792
Gammaproteobacteria
TGC
Ala
>WENV170218865
CEPZ01026394
296672
Gammaproteobacteria
GGT
Thr
>WENV170219311
CEPZ01055322
118371
Gammaproteobacteria
CAA
Leu
>WENV170219275
CEPZ01053546
481314
Gammaproteobacteria
GCA
Cys
>WENV170219952
CEPZ01086526
400372
Gammaproteobacteria
CCT
Arg
>WENV170218863
CEPZ01026394
141076
Gammaproteobacteria
GTA
Tyr
>WENV170218975
CEPZ01032617
186591
Gammaproteobacteria
ACG
Arg
>WENV170220784
CEPZ01198803
179189
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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