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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170221922
CEQC01029605
178497
Alphaproteobacteria
CCG
Arg
>WENV170221800
CEQC01010993
401056
Alphaproteobacteria
TTC
Glu
>WENV170221801
CEQC01010993
401056
Alphaproteobacteria
TTC
Glu
>WENV170221745
CEQC01005293
289412
Alphaproteobacteria
CCA
Trp
>WENV170221762
CEQC01006817
193463
Alphaproteobacteria
CCT
Arg
>WENV170221927
CEQC01030261
201940
Alphaproteobacteria
CAT
Met
>WENV170221701
CEQC01002646
400518
Alphaproteobacteria
GAA
Phe
>WENV170221674
CEQC01000067
400518
Alphaproteobacteria
GAA
Phe
>WENV170221837
CEQC01016243
195445
Alphaproteobacteria
CAT
Met
>WENV170221916
CEQC01028675
288727
Alphaproteobacteria
>WENV170221705
CEQC01003047
400516
Alphaproteobacteria
TTG
Gln
>WENV170221792
CEQC01009914
100096
Alphaproteobacteria
TAA
Leu
>WENV170221891
CEQC01025961
183632
Alphaproteobacteria
GGG
Pro
>WENV170221900
CEQC01027187
181950
Alphaproteobacteria
TCT
Arg
>WENV170221906
CEQC01027448
427571
Alphaproteobacteria
GCC
Gly
>WENV170221957
CEQC01036001
280860
Alphaproteobacteria
TAC
Val
>WENV170221901
CEQC01027224
73167
Alphaproteobacteria
GAG
Leu
>WENV170221772
CEQC01007633
192275
Alphaproteobacteria
GTG
His
>WENV170221710
CEQC01003258
192275
Alphaproteobacteria
GTG
His
>WENV170221972
CEQC01037593
400544
Alphaproteobacteria
GGT
Thr
>WENV170221735
CEQC01004601
400517
Alphaproteobacteria
GGT
Thr
>WENV170221939
CEQC01033789
481098
Alphaproteobacteria
CTG
Gln
>WENV170221848
CEQC01018095
481098
Alphaproteobacteria
CTG
Gln
>WENV170221754
CEQC01006183
481098
Alphaproteobacteria
CTG
Gln
>WENV170222020
CEQC01071042
231487
Alphaproteobacteria
TCT
Arg
>WENV170221936
CEQC01033091
32168
Alphaproteobacteria
CGA
Ser
>WENV170221860
CEQC01019868
422170
Alphaproteobacteria
GGT
Thr
>WENV170222019
CEQC01069920
403581
Alphaproteobacteria
TTG
Gln
>WENV170221758
CEQC01006579
178736
Alphaproteobacteria
CCT
Arg
>WENV170221934
CEQC01032185
233665
Alphaproteobacteria
CCT
Arg
>WENV170221774
CEQC01007848
282981
Alphaproteobacteria
CCA
Trp
>WENV170221965
CEQC01037214
400106
Alphaproteobacteria
GTT
Asn
>WENV170221757
CEQC01006325
228484
Alphaproteobacteria
CCG
Arg
>WENV170221828
CEQC01015168
481099
Alphaproteobacteria
TCC
Gly
>WENV170221783
CEQC01008692
404182
Alphaproteobacteria
CAC
Val
>WENV170221698
CEQC01002145
29739
Alphaproteobacteria
CGA
Ser
>WENV170221836
CEQC01016190
305449
Alphaproteobacteria
CGT
Thr
>WENV170221770
CEQC01007129
13340
Alphaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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