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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170222948
CEQD01085456
299509
Alphaproteobacteria
GTT
Asn
>WENV170223228
CEQD01120718
299458
Alphaproteobacteria
TTT
Lys
>WENV170222147
CEQD01006188
201940
Alphaproteobacteria
CAT
Met
>WENV170222327
CEQD01023393
201940
Alphaproteobacteria
CAT
Met
>WENV170223242
CEQD01121897
201940
Alphaproteobacteria
CAT
Met
>WENV170223178
CEQD01115147
197241
Alphaproteobacteria
GGG
Pro
>WENV170222960
CEQD01086543
193088
Alphaproteobacteria
GAT
Ile
>WENV170222839
CEQD01071716
29702
Alphaproteobacteria
GGA
Ser
>WENV170222611
CEQD01045765
408543
Alphaproteobacteria
GAC
Val
>WENV170222154
CEQD01006809
408543
Alphaproteobacteria
GAC
Val
>WENV170222640
CEQD01047549
178509
Alphaproteobacteria
CCT
Arg
>WENV170222226
CEQD01014041
197061
Alphaproteobacteria
CCT
Arg
>WENV170222131
CEQD01005042
195451
Alphaproteobacteria
GAC
Val
>WENV170222132
CEQD01005042
195451
Alphaproteobacteria
GAC
Val
>WENV170223583
CEQD01220291
400544
Alphaproteobacteria
GGT
Thr
>WENV170222323
CEQD01023070
400517
Alphaproteobacteria
GGT
Thr
>WENV170223086
CEQD01103105
488318
Alphaproteobacteria
TCC
Gly
>WENV170222778
CEQD01063824
398994
Alphaproteobacteria
GTT
Asn
>WENV170222173
CEQD01008430
29495
Alphaproteobacteria
GCT
Ser
>WENV170222773
CEQD01063478
480900
Alphaproteobacteria
GCA
Cys
>WENV170223144
CEQD01108904
283257
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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