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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170226658
CEQF01004344
192275
Alphaproteobacteria
GTG
His
>WENV170226662
CEQF01004477
178733
Alphaproteobacteria
CAT
Met
>WENV170226663
CEQF01004477
178734
Alphaproteobacteria
TGG
Pro
>WENV170226687
CEQF01005955
121250
Alphaproteobacteria
TAG
Leu
>WENV170226715
CEQF01009561
288727
Alphaproteobacteria
>WENV170226921
CEQF01027602
201940
Alphaproteobacteria
CAT
Met
>WENV170226971
CEQF01032949
400516
Alphaproteobacteria
TTG
Gln
>WENV170226992
CEQF01034923
193463
Alphaproteobacteria
CCT
Arg
>WENV170227014
CEQF01037151
282981
Alphaproteobacteria
CCA
Trp
>WENV170227397
CEQF01080095
13340
Alphaproteobacteria
GCT
Ser
>WENV170227444
CEQF01087312
73523
Alphaproteobacteria
CAG
Leu
>WENV170227465
CEQF01089951
481099
Alphaproteobacteria
TCC
Gly
>WENV170227488
CEQF01093076
481098
Alphaproteobacteria
CTG
Gln
>WENV170227661
CEQF01117258
480900
Alphaproteobacteria
GCA
Cys
>WENV170227662
CEQF01117258
282748
Alphaproteobacteria
CGT
Thr
>WENV170227699
CEQF01122482
178050
Alphaproteobacteria
GTG
His
>WENV170228158
CEQF01225515
284697
Alphaproteobacteria
GAA
Phe
>WENV170228263
CEQF01258886
178731
Alphaproteobacteria
GTC
Asp
>WENV170228312
CEQF01264130
400517
Alphaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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