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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170226641
CEQF01002419
311084
Gammaproteobacteria
GCC
Gly
>WENV170226688
CEQF01006388
178164
Gammaproteobacteria
GAT
Ile
>WENV170226699
CEQF01008030
176244
Gammaproteobacteria
TGG
Pro
>WENV170226720
CEQF01009976
30550
Gammaproteobacteria
GGA
Ser
>WENV170226723
CEQF01010367
21947
Gammaproteobacteria
TGA
Ser
>WENV170226724
CEQF01010367
21947
Gammaproteobacteria
TGA
Ser
>WENV170226760
CEQF01013355
282550
Gammaproteobacteria
TAC
Val
>WENV170226774
CEQF01014234
283227
Gammaproteobacteria
TAC
Val
>WENV170226783
CEQF01014868
197498
Gammaproteobacteria
TGG
Pro
>WENV170226788
CEQF01015231
20407
Gammaproteobacteria
TGA
Ser
>WENV170226812
CEQF01017514
306288
Gammaproteobacteria
GCC
Gly
>WENV170226871
CEQF01022802
329164
Gammaproteobacteria
TTT
Lys
>WENV170226904
CEQF01026135
480629
Gammaproteobacteria
GCA
Cys
>WENV170226914
CEQF01026971
220813
Gammaproteobacteria
CCG
Arg
>WENV170226938
CEQF01029924
178472
Gammaproteobacteria
CAT
Met
>WENV170226996
CEQF01035130
292006
Gammaproteobacteria
TGC
Ala
>WENV170227066
CEQF01041175
185999
Gammaproteobacteria
CCG
Arg
>WENV170227127
CEQF01048253
29419
Gammaproteobacteria
GGA
Ser
>WENV170227129
CEQF01048469
180053
Gammaproteobacteria
CAT
Met
>WENV170227170
CEQF01052247
283227
Gammaproteobacteria
TAC
Val
>WENV170227169
CEQF01052247
283226
Gammaproteobacteria
TAC
Val
>WENV170227199
CEQF01055533
117821
Gammaproteobacteria
GTA
Tyr
>WENV170227215
CEQF01057503
201377
Gammaproteobacteria
TGG
Pro
>WENV170227343
CEQF01072797
140925
Gammaproteobacteria
GTA
Tyr
>WENV170227359
CEQF01074773
178469
Gammaproteobacteria
CAT
Met
>WENV170227374
CEQF01076450
178466
Gammaproteobacteria
CCA
Trp
>WENV170227378
CEQF01076995
118341
Gammaproteobacteria
CAA
Leu
>WENV170227507
CEQF01096659
178540
Gammaproteobacteria
TGG
Pro
>WENV170227528
CEQF01099807
118207
Gammaproteobacteria
GAG
Leu
>WENV170227534
CEQF01100693
176241
Gammaproteobacteria
CGG
Pro
>WENV170227561
CEQF01103659
297858
Gammaproteobacteria
TGC
Ala
>WENV170227601
CEQF01109074
180680
Gammaproteobacteria
GAC
Val
>WENV170227619
CEQF01111545
297858
Gammaproteobacteria
TGC
Ala
>WENV170227627
CEQF01112640
74339
Gammaproteobacteria
GAG
Leu
>WENV170227683
CEQF01119831
280882
Gammaproteobacteria
GTG
His
>WENV170227827
CEQF01141304
283222
Gammaproteobacteria
GTG
His
>WENV170227856
CEQF01145171
29695
Gammaproteobacteria
GGA
Ser
>WENV170227868
CEQF01146893
371341
Gammaproteobacteria
GTT
Asn
>WENV170227906
CEQF01150102
73063
Gammaproteobacteria
TAA
Leu
>WENV170227909
CEQF01150724
351236
Gammaproteobacteria
TTT
Lys
>WENV170227954
CEQF01155149
178469
Gammaproteobacteria
CAT
Met
>WENV170227956
CEQF01155167
480516
Gammaproteobacteria
GCA
Cys
>WENV170228017
CEQF01173518
399050
Gammaproteobacteria
CCT
Arg
>WENV170228069
CEQF01191973
73498
Gammaproteobacteria
CAA
Leu
>WENV170228258
CEQF01257758
74048
Gammaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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