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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
135 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170229524
CEQG01128539
190614
Alphaproteobacteria
TGG
Pro
>WENV170229652
CEQG01144906
190614
Alphaproteobacteria
TGG
Pro
>WENV170229277
CEQG01096996
179841
Alphaproteobacteria
CCT
Arg
>WENV170228818
CEQG01044990
178510
Alphaproteobacteria
ACG
Arg
>WENV170228445
CEQG01012265
296698
Alphaproteobacteria
CGC
Ala
>WENV170229610
CEQG01139152
296698
Alphaproteobacteria
CGC
Ala
>WENV170229748
CEQG01153484
486926
Alphaproteobacteria
CCC
Gly
>WENV170228959
CEQG01056832
489502
Alphaproteobacteria
GCA
Cys
>WENV170228353
CEQG01003835
489502
Alphaproteobacteria
GCA
Cys
>WENV170229335
CEQG01106415
404641
Alphaproteobacteria
CAC
Val
>WENV170229657
CEQG01145702
399001
Alphaproteobacteria
GAC
Val
>WENV170228831
CEQG01046088
179639
Alphaproteobacteria
ACG
Arg
>WENV170229576
CEQG01135204
400848
Alphaproteobacteria
GAC
Val
>WENV170229225
CEQG01091492
481048
Alphaproteobacteria
GCA
Cys
>WENV170229623
CEQG01140060
482902
Alphaproteobacteria
TCC
Gly
>WENV170229108
CEQG01074935
401056
Alphaproteobacteria
TTC
Glu
>WENV170228342
CEQG01002953
29841
Alphaproteobacteria
GGA
Ser
>WENV170229419
CEQG01117229
223678
Alphaproteobacteria
GTC
Asp
>WENV170228511
CEQG01017195
223678
Alphaproteobacteria
GTC
Asp
>WENV170228815
CEQG01044533
140876
Alphaproteobacteria
>WENV170229193
CEQG01085048
140876
Alphaproteobacteria
>WENV170228598
CEQG01023551
178050
Alphaproteobacteria
GTG
His
>WENV170229571
CEQG01134004
193463
Alphaproteobacteria
CCT
Arg
>WENV170229733
CEQG01152582
193463
Alphaproteobacteria
CCT
Arg
>WENV170228933
CEQG01054504
210530
Alphaproteobacteria
CGG
Pro
>WENV170228607
CEQG01024121
178725
Alphaproteobacteria
GTG
His
>WENV170229656
CEQG01145526
20437
Alphaproteobacteria
GGA
Ser
>WENV170229452
CEQG01121366
284697
Alphaproteobacteria
GAA
Phe
>WENV170228403
CEQG01008040
481802
Alphaproteobacteria
TCC
Gly
>WENV170228849
CEQG01047116
140893
Alphaproteobacteria
CAA
Leu
>WENV170228566
CEQG01021633
140893
Alphaproteobacteria
CAA
Leu
>WENV170229093
CEQG01074154
400518
Alphaproteobacteria
GAA
Phe
>WENV170229010
CEQG01063789
178263
Alphaproteobacteria
GTG
His
>WENV170229055
CEQG01070574
400530
Alphaproteobacteria
GAC
Val
>WENV170229013
CEQG01064086
283601
Alphaproteobacteria
CGT
Thr
>WENV170229504
CEQG01125576
288727
Alphaproteobacteria
>WENV170229038
CEQG01068266
177003
Alphaproteobacteria
CCT
Arg
>WENV170229527
CEQG01128603
314617
Alphaproteobacteria
TAC
Val
>WENV170229573
CEQG01134466
399480
Alphaproteobacteria
GAA
Phe
>WENV170228545
CEQG01018926
281659
Alphaproteobacteria
TGC
Ala
>WENV170229030
CEQG01066290
400384
Alphaproteobacteria
TTC
Glu
>WENV170229351
CEQG01108346
400384
Alphaproteobacteria
TTC
Glu
>WENV170228699
CEQG01032994
100096
Alphaproteobacteria
TAA
Leu
>WENV170228574
CEQG01022591
282977
Alphaproteobacteria
CAT
Met
>WENV170229241
CEQG01093044
283398
Alphaproteobacteria
TGC
Ala
>WENV170228633
CEQG01027453
403836
Alphaproteobacteria
>WENV170228402
CEQG01007881
399340
Alphaproteobacteria
GTT
Asn
>WENV170228662
CEQG01029796
400514
Alphaproteobacteria
TTG
Gln
>WENV170229918
CEQG01237940
178734
Alphaproteobacteria
TGG
Pro
>WENV170229226
CEQG01091640
29702
Alphaproteobacteria
GGA
Ser
>WENV170229325
CEQG01105183
301916
Alphaproteobacteria
TAC
Val
>WENV170229388
CEQG01114045
408543
Alphaproteobacteria
GAC
Val
>WENV170229471
CEQG01123752
183632
Alphaproteobacteria
GGG
Pro
>WENV170228744
CEQG01036906
183632
Alphaproteobacteria
GGG
Pro
>WENV170228314
CEQG01000044
178733
Alphaproteobacteria
CAT
Met
>WENV170228462
CEQG01013141
427571
Alphaproteobacteria
GCC
Gly
>WENV170228936
CEQG01054659
427571
Alphaproteobacteria
GCC
Gly
>WENV170229591
CEQG01137053
179941
Alphaproteobacteria
CAT
Met
>WENV170228746
CEQG01037330
178509
Alphaproteobacteria
CCT
Arg
>WENV170229647
CEQG01144107
178509
Alphaproteobacteria
CCT
Arg
>WENV170229750
CEQG01153594
320046
Alphaproteobacteria
CGT
Thr
>WENV170229378
CEQG01112787
176153
Alphaproteobacteria
CAT
Met
>WENV170229646
CEQG01143704
102146
Alphaproteobacteria
GTA
Tyr
>WENV170229454
CEQG01121639
102146
Alphaproteobacteria
GTA
Tyr
>WENV170229436
CEQG01119018
102146
Alphaproteobacteria
GTA
Tyr
>WENV170228557
CEQG01020362
73986
Alphaproteobacteria
CAG
Leu
>WENV170229578
CEQG01135245
280860
Alphaproteobacteria
TAC
Val
>WENV170229029
CEQG01066281
400250
Alphaproteobacteria
GAC
Val
>WENV170228498
CEQG01016108
100184
Alphaproteobacteria
CAG
Leu
>WENV170228452
CEQG01012492
73167
Alphaproteobacteria
GAG
Leu
>WENV170228850
CEQG01047217
73167
Alphaproteobacteria
GAG
Leu
>WENV170229458
CEQG01122002
29727
Alphaproteobacteria
CGA
Ser
>WENV170228917
CEQG01053398
117819
Alphaproteobacteria
TAG
Leu
>WENV170228367
CEQG01004947
29701
Alphaproteobacteria
CGA
Ser
>WENV170228442
CEQG01011996
283510
Alphaproteobacteria
TTT
Lys
>WENV170229069
CEQG01071422
283510
Alphaproteobacteria
TTT
Lys
>WENV170229307
CEQG01101547
21542
Alphaproteobacteria
GGA
Ser
>WENV170228639
CEQG01027929
400419
Alphaproteobacteria
TTG
Gln
>WENV170229319
CEQG01103853
400544
Alphaproteobacteria
GGT
Thr
>WENV170228956
CEQG01056713
281650
Alphaproteobacteria
CCA
Trp
>WENV170229334
CEQG01106195
481098
Alphaproteobacteria
CTG
Gln
>WENV170229211
CEQG01088661
481098
Alphaproteobacteria
CTG
Gln
>WENV170229006
CEQG01063366
481098
Alphaproteobacteria
CTG
Gln
>WENV170228763
CEQG01038706
284698
Alphaproteobacteria
TTT
Lys
>WENV170228713
CEQG01033837
400048
Alphaproteobacteria
GGT
Thr
>WENV170228614
CEQG01025395
32168
Alphaproteobacteria
CGA
Ser
>WENV170229044
CEQG01068844
178728
Alphaproteobacteria
CGG
Pro
>WENV170229324
CEQG01105183
212319
Alphaproteobacteria
GTG
His
>WENV170228904
CEQG01051806
13331
Alphaproteobacteria
GCT
Ser
>WENV170229375
CEQG01112349
422170
Alphaproteobacteria
GGT
Thr
>WENV170229084
CEQG01073463
422170
Alphaproteobacteria
GGT
Thr
>WENV170228622
CEQG01025983
400515
Alphaproteobacteria
GAC
Val
>WENV170228732
CEQG01035072
400515
Alphaproteobacteria
GAC
Val
>WENV170229279
CEQG01097446
403581
Alphaproteobacteria
TTG
Gln
>WENV170229314
CEQG01102523
178736
Alphaproteobacteria
CCT
Arg
>WENV170229076
CEQG01072685
398994
Alphaproteobacteria
GTT
Asn
>WENV170229298
CEQG01100074
398994
Alphaproteobacteria
GTT
Asn
>WENV170229517
CEQG01127206
398994
Alphaproteobacteria
GTT
Asn
>WENV170228332
CEQG01002241
399000
Alphaproteobacteria
TTC
Glu
>WENV170229474
CEQG01123872
329227
Alphaproteobacteria
TGC
Ala
>WENV170228770
CEQG01039010
281676
Alphaproteobacteria
TAC
Val
>WENV170228350
CEQG01003374
282981
Alphaproteobacteria
CCA
Trp
>WENV170229352
CEQG01108677
400106
Alphaproteobacteria
GTT
Asn
>WENV170229689
CEQG01148915
178507
Alphaproteobacteria
GTG
His
>WENV170229313
CEQG01102304
121990
Alphaproteobacteria
TAG
Leu
>WENV170228650
CEQG01028941
481099
Alphaproteobacteria
TCC
Gly
>WENV170228870
CEQG01048536
481099
Alphaproteobacteria
TCC
Gly
>WENV170229199
CEQG01086238
481099
Alphaproteobacteria
TCC
Gly
>WENV170229303
CEQG01100472
481099
Alphaproteobacteria
TCC
Gly
>WENV170228755
CEQG01038121
283255
Alphaproteobacteria
GGC
Ala
>WENV170228451
CEQG01012395
480900
Alphaproteobacteria
GCA
Cys
>WENV170229147
CEQG01079397
480900
Alphaproteobacteria
GCA
Cys
>WENV170229389
CEQG01114160
190609
Alphaproteobacteria
TCT
Arg
>WENV170228992
CEQG01061024
400386
Alphaproteobacteria
TTG
Gln
>WENV170228877
CEQG01048989
411290
Alphaproteobacteria
CAC
Val
>WENV170229526
CEQG01128603
411290
Alphaproteobacteria
CAC
Val
>WENV170229411
CEQG01116318
29739
Alphaproteobacteria
CGA
Ser
>WENV170228575
CEQG01022591
199536
Alphaproteobacteria
TGG
Pro
>WENV170229745
CEQG01153374
398996
Alphaproteobacteria
GCC
Gly
>WENV170229407
CEQG01115798
398996
Alphaproteobacteria
GCC
Gly
>WENV170229249
CEQG01093453
398996
Alphaproteobacteria
GCC
Gly
>WENV170228325
CEQG01001079
398996
Alphaproteobacteria
GCC
Gly
>WENV170229185
CEQG01084358
398996
Alphaproteobacteria
GCC
Gly
>WENV170229248
CEQG01093453
398996
Alphaproteobacteria
GCC
Gly
>WENV170228404
CEQG01008240
308123
Alphaproteobacteria
CCA
Trp
>WENV170229592
CEQG01137446
403890
Alphaproteobacteria
GAC
Val
>WENV170228322
CEQG01000980
178576
Alphaproteobacteria
ACG
Arg
>WENV170228323
CEQG01000980
178576
Alphaproteobacteria
ACG
Arg
>WENV170229143
CEQG01078756
13606
Alphaproteobacteria
GCT
Ser
>WENV170228799
CEQG01042231
283257
Alphaproteobacteria
TTT
Lys
>WENV170229203
CEQG01087236
283257
Alphaproteobacteria
TTT
Lys
>WENV170229649
CEQG01144618
283257
Alphaproteobacteria
TTT
Lys
>WENV170229444
CEQG01120153
13340
Alphaproteobacteria
GCT
Ser
>WENV170228472
CEQG01013512
73523
Alphaproteobacteria
CAG
Leu
>WENV170228406
CEQG01008357
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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